GSDA-package: Gene Set Distance Analysis (GSDA)

In GSDA: Gene Set Distance Analysis (GSDA)

Description

The gene-set distance analysis of omic data is implemented by generalizing distance correlations to evaluate the association of a gene set with categorical and censored event-time variables.

Details

The DESCRIPTION file: This package was not yet installed at build time.
Index: This package was not yet installed at build time.

Author(s)

Xueyuan Cao [aut, cre], Stanley Pounds [aut]

Maintainer: Xueyuan Cao <[e-mail]>

References

Cao X and Pounds S (2021) Gene-Set Distance Associations (GSDA): A Powerful Tool for Gene-Set Association Analysis.

Examples

data(target.aml.clin)
data(target.aml.expr)
data(kegg.ml.gsets)
res=gsda(target.aml.expr,
         target.aml.clin,
         kegg.ml.gsets,
         "Chloroma","oe","ct")

GSDA documentation built on Jan. 18, 2021, 5:05 p.m.