| get.mat.omega | R Documentation | 
find omega correlation leading to estimates cor between occurrences
get.mat.omega(cor.obs, Qtrans.mat, mat.comb, nLag, nChainFit, isParallel)
cor.obs | 
 matrix p x p of observed correlations between occurrences for all pairs of stations  | 
Qtrans.mat | 
 transition probabilities, 2 x ncomb matrix  | 
mat.comb | 
 matrix of logical: ncomb x nlag  | 
nLag | 
 order of the Markov chain  | 
nChainFit | 
 length of the simulated chains used during the fitting  | 
isParallel | 
 logical: indicate computation in parallel or not (easier for debugging)  | 
matrix | 
 omega correlations for all pairs of stations  | 
Guillaume Evin
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