save.gwaa.data: function to save gwaa.data object
In GenABEL: genome-wide SNP association analysis
Description
Usage
Arguments
Details
Value
Author(s)
See Also
Description
Saves GenABEL data in internal format
Usage
1
2
save.gwaa.data(data, phenofile = "pheno.dat", genofile = "geno.raw",
human = FALSE)
Arguments
data
gwaa.data object
phenofile
name of file where the phenotypes will be saved to
genofile
name of file where the genotypes will be saved to
human
if human=TRUE, saves in human-readable format (to be converted to internal format later)
Details
When running with human=TRUE, a lot of memory (and time to complete the operation)
is required. Probably, this option would not work because of memory limitations
in a GWA scan iwth more then few hundreds of people.
This is possible to fix; drop me a message if you need that.
Value
No value returned
Author(s)
Yurii Aulchenko
See Also
GenABEL documentation built on May 30, 2017, 3:36 a.m.
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Description Usage Arguments Details Value Author(s) See Also
Description
Saves GenABEL data in internal format
Usage
1 2 | save.gwaa.data(data, phenofile = "pheno.dat", genofile = "geno.raw",
human = FALSE)
|
Arguments
data |
gwaa.data object |
phenofile |
name of file where the phenotypes will be saved to |
genofile |
name of file where the genotypes will be saved to |
human |
if human=TRUE, saves in human-readable format (to be converted to internal format later) |
Details
When running with human=TRUE, a lot of memory (and time to complete the operation) is required. Probably, this option would not work because of memory limitations in a GWA scan iwth more then few hundreds of people. This is possible to fix; drop me a message if you need that.
Value
No value returned
Author(s)
Yurii Aulchenko
See Also
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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