recodeData: Recode a Genotype Data Matrix.
In GeneticTools: Collection of Genetic Data Analysis Tools
Description
Usage
Arguments
Details
Value
Author(s)
See Also
Examples
Description
This function recodes a genotype data matrix in a format as expected from eqtl or mdr.
Usage
1
recodeData(X)
Arguments
X
Matrix with genotype information.
Details
This function recodes the values given in the data matrix X (typically AA, AB and BB) and
substitutes it with 0,1 and 2. Missing values are encoded as 3.
Value
A matrix with same dimension as the input, but in 0,1,2 encoding.
Author(s)
Daniel Fischer
See Also
Examples
1
2
3
# genotData <- read.table("MDR_format_ready_BCR.txt",header=T)
# temp <- recodeData(genotData)
GeneticTools documentation built on Jan. 15, 2017, 11:21 a.m.
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Description Usage Arguments Details Value Author(s) See Also Examples
Description
This function recodes a genotype data matrix in a format as expected from eqtl or mdr.
Usage
1 | recodeData(X)
|
Arguments
X |
Matrix with genotype information. |
Details
This function recodes the values given in the data matrix X (typically AA, AB and BB) and
substitutes it with 0,1 and 2. Missing values are encoded as 3.
Value
A matrix with same dimension as the input, but in 0,1,2 encoding.
Author(s)
Daniel Fischer
See Also
Examples
1 2 3 | # genotData <- read.table("MDR_format_ready_BCR.txt",header=T)
# temp <- recodeData(genotData)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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