Description Usage Arguments Value Author(s) References Examples
This calculates the genomic relationship matrix using the formula in VanRaden (2008)
1 | Amat.pieces(M, pieces=10, mc.cores=1)
|
M |
The matrix of markers rows rorresponding to individuals and columns for markers, the markers scores are coded as -1,0,1 (corresponding to allele counts 0,1,2). |
pieces |
number of chunks to split the markers |
mc.cores |
number of cores to use |
a genomic relationship matrix.
Deniz Akdemir, Julio Isidro Sanch\'ez, Hanna Haikka, Itaraju Baracuhy Brum
VanRaden, Paul M. ”Efficient methods to compute genomic predictions.” Journal of dairy science 91.11 (2008): 4414-4423.
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