API for GenomicTools
Collection of Tools for Genomic Data Analysis
| Global functions | |
|---|---|
| QTL | Man page Source code |
| R/GenomicTools-package | Man page |
| `plot.eqtl` | Source code |
| `plot.mdr` | Source code |
| `plot.qtlRes` | Source code |
| `plotSingle.eqtl` | Source code |
| `predict.mdr` | Source code |
| `print.PedMap` | Source code |
| `print.eqtl` | Source code |
| `print.mdrEnsemble` | Source code |
| `print.mdrPredict` | Source code |
| `print.mdr` | Source code |
| `print.qtlRes` | Source code |
| `print.vcf` | Source code |
| annotTrack | Man page |
| calcDistances.C | Source code |
| cbind.fill | Source code |
| chrOrder | Source code |
| columnLabels | Source code |
| eQTL | Man page Source code |
| eqtlDir | Source code |
| eqtlLM | Source code |
| eqtlLM.internal | Source code |
| eqtlLM.naive | Source code |
| geneEXP | Man page |
| genotData | Man page |
| genotypePlot | Source code |
| getKEGGOrganisms | Man page Source code |
| getKEGGPathway | Man page Source code |
| getKEGGPathwayImage | Man page Source code |
| getKEGGPathwayOverview | Man page Source code |
| getRSLocation | Man page Source code |
| getRegionsOI | Source code |
| getSNPlocations | Source code |
| gtfToBed | Man page Source code |
| joinEQTL | Source code |
| joinEQTLsig | Source code |
| makeAnnotList | Source code |
| matrixToGenomatrix | Source code |
| mdr | Man page Source code |
| mdr.C | Source code |
| mdrEnsemble | Man page Source code |
| mdrExample | Man page |
| mdrTable | Source code |
| pairwiseDiffs | Source code |
| phenoData | Man page |
| plot,eqtl-method | Man page |
| plot,mdr-method | Man page |
| plot,qtl-method | Man page |
| plot.eqtl | Man page |
| plot.mdr | Man page |
| plot.qtlRes | Man page |
| plot.trans | Source code |
| plotGeneLocation | Source code |
| plotIt | Source code |
| print,eqtl-method | Man page |
| print,mdr-method | Man page |
| print-method | Man page |
| print.eqtl | Man page |
| print.mdr | Man page |
| rearrange | Source code |
| recodeData | Man page Source code |
| seqlength | Man page Source code |
| summary,eqtl-method | Man page |
| summary-method | Man page |
| summary.PedMap | Source code |
| summary.eqtl | Man page Source code |
| summary.mdr | Source code |
| summary.qtlRes | Source code |
| vectorToGenomatrix | Source code |
