getElbowPoint: Estimation of elbow point from J-shaped-curve
In HiCociety: Inferring Chromatin Interaction Modules from 3C-Based Data
getElbowPoint R Documentation
Estimation of elbow point from J-shaped-curve
Description
It provides a point of the highest curvature from a J-shaped-plot
Usage
getElbowPoint(numbers)
Arguments
numbers
Numeric vector
Details
Estimation of elbow point from J-shaped curve
Value
A list containing two elements: index, the index of a point in a sorted vector of numbers in descending order, representing the point where the tangent is closest to one, and ConnectivityCutoff, the corresponding value at that point.
Author(s)
Sora Yoon, PhD
Examples
modulefile = system.file('extdata','mouse_naiveCD4T_Vahedi_short.rds',
package = 'HiCocietyExample')
mycom = readRDS(modulefile)
connec = mycom$ModuleSummary$connectivity
getElbowPoint(connec)
HiCociety documentation built on Feb. 16, 2026, 5:10 p.m.
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| getElbowPoint | R Documentation |
Estimation of elbow point from J-shaped-curve
Description
It provides a point of the highest curvature from a J-shaped-plot
Usage
getElbowPoint(numbers)
Arguments
numbers |
Numeric vector |
Details
Estimation of elbow point from J-shaped curve
Value
A list containing two elements: index, the index of a point in a sorted vector of numbers in descending order, representing the point where the tangent is closest to one, and ConnectivityCutoff, the corresponding value at that point.
Author(s)
Sora Yoon, PhD
Examples
modulefile = system.file('extdata','mouse_naiveCD4T_Vahedi_short.rds',
package = 'HiCocietyExample')
mycom = readRDS(modulefile)
connec = mycom$ModuleSummary$connectivity
getElbowPoint(connec)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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