R/Q2vector.R

Defines functions Q2vector

Documented in Q2vector

Q2vector <- function(Q){
    #   map mmpp Q rate matrix to vector
    #   use log like constraints
    m <- nrow(Q)
    p <- log(as.vector(Q[as.logical(1-diag(m))]))
    return(p)
}

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HiddenMarkov documentation built on April 27, 2021, 5:06 p.m.