HiveR: 2D and 3D Hive Plots for R

Creates and plots 2D and 3D hive plots. Hive plots are a unique method of displaying networks of many types in which node properties are mapped to axes using meaningful properties rather than being arbitrarily positioned. The hive plot concept was invented by Martin Krzywinski at the Genome Science Center (www.hiveplot.net/). Keywords: networks, food webs, linnet, systems biology, bioinformatics.

AuthorBryan A. Hanson [aut, cre], Vesna Memisevic [ctb], Jonathan Chung [ctb]
Date of publication2016-03-26 15:16:56
MaintainerBryan A. Hanson <hanson@depauw.edu>
LicenseGPL-3
Version0.2.55
http://academic.depauw.edu/~hanson/HiveR/HiveR.html

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Files

HiveR
HiveR/inst
HiveR/inst/CITATION
HiveR/inst/extdata
HiveR/inst/extdata/E_coli
HiveR/inst/extdata/E_coli/EdgeInst_TF.csv
HiveR/inst/extdata/E_coli/EdgeInst_P.csv
HiveR/inst/extdata/E_coli/README
HiveR/inst/extdata/E_coli/E_coli_P.dot
HiveR/inst/extdata/E_coli/NodeLabels_P.csv
HiveR/inst/extdata/E_coli/NodeInst_P.csv
HiveR/inst/extdata/E_coli/E_coli_TF.dot
HiveR/inst/extdata/Misc
HiveR/inst/extdata/Misc/GreenEye.jpg
HiveR/inst/extdata/Misc/BrownEye.jpg
HiveR/inst/extdata/Misc/HECgraphics.txt
HiveR/inst/extdata/Misc/HazelEye.jpg
HiveR/inst/extdata/Misc/README
HiveR/inst/extdata/Misc/HECnodes.txt
HiveR/inst/extdata/Misc/HECticks.txt
HiveR/inst/extdata/Misc/BlueEye.jpg
HiveR/inst/doc
HiveR/inst/doc/HiveR.Rnw
HiveR/inst/doc/HiveR.R
HiveR/inst/doc/HiveR.pdf
HiveR/NAMESPACE
HiveR/NEWS
HiveR/data
HiveR/data/HEC.RData
HiveR/data/Arroyo.RData
HiveR/data/Safari.RData
HiveR/R
HiveR/R/dot2HPD.R HiveR/R/adj2HPD.R HiveR/R/animateHive.R HiveR/R/manipAxis.R HiveR/R/mineHPD.R HiveR/R/sumHPD.R HiveR/R/sph2cart.R HiveR/R/plotHive.R HiveR/R/plot3dHive.R HiveR/R/rcsr.R HiveR/R/ranHiveData.R HiveR/R/chkHPD.R HiveR/R/edge2HPD.R HiveR/R/drawHiveSpline.R
HiveR/vignettes
HiveR/vignettes/graphics
HiveR/vignettes/graphics/Mapping_1a.pdf
HiveR/vignettes/graphics/VSEPR.pdf
HiveR/vignettes/graphics/plot3dHive_performance.pdf
HiveR/vignettes/graphics/Spline3D.png
HiveR/vignettes/graphics/Mapping_1ab.pdf
HiveR/vignettes/graphics/plotHive_performance.pdf
HiveR/vignettes/graphics/nature10719-f32_inset.jpg
HiveR/vignettes/graphics/nature10719-f32.jpg
HiveR/vignettes/graphics/HIVhuH3.png
HiveR/vignettes/HiveR.Rnw
HiveR/vignettes/network_tf_gene.parsed.dot
HiveR/vignettes/EdgeInst.csv
HiveR/vignettes/HIVhuH3.RData
HiveR/vignettes/HiveR.bib
HiveR/MD5
HiveR/build
HiveR/build/vignette.rds
HiveR/DESCRIPTION
HiveR/man
HiveR/man/Arroyo.Rd HiveR/man/chkHPD.Rd HiveR/man/HEC.Rd HiveR/man/ranHiveData.Rd HiveR/man/sph2cart.Rd HiveR/man/dot2HPD.Rd HiveR/man/manipAxis.Rd HiveR/man/drawHiveSpline.Rd HiveR/man/adj2HPD.Rd HiveR/man/HivePlotData.Rd HiveR/man/edge2HPD.Rd HiveR/man/HidingAnAxis.Rd HiveR/man/animateHive.Rd HiveR/man/HiveR-package.Rd HiveR/man/rcsr.Rd HiveR/man/plotHive.Rd HiveR/man/mineHPD.Rd HiveR/man/sumHPD.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.