INCA.DyeSwap: DyeSwap Method for two-color microarray data

In INCATome: Internal Control Analysis of Translatome Studies by Microarrays

Description

Performs a dyeswap correction by an averaging method for two-color microarray data.

Usage

INCA.DyeSwap(x, dsvect)

Arguments

x	an RGList object
dsvect	an integer vector specifying dyeswapped microarrays. Needs to be of same length as number of arrays contained in the RGList object. Labelling should start from 1 and associates dyeswapped microarray with "-i".

Value

a new RGList object containing the dyeswapped array data.

Examples

#Load the INCATome Dataset
data(INCATomeData)
attach(INCATomeData)
ds=INCA.DyeSwap(RGdataNM,c(1,2,3,4,5,6,-1,-2,-3,-4,-5,-6))

INCATome documentation built on May 2, 2019, 2:38 a.m.