NCI60: NCI 60 Data

Description Usage Format Source References Examples

Description

NCI microarray data. The data contains expression levels on 6830 genes from 64 cancer cell lines. Cancer type is also recorded.

Usage

1

Format

The format is a list containing two elements: data and labs.

data is a 64 by 6830 matrix of the expression values while labs is a vector listing the cancer types for the 64 cell lines.

Source

The data come from Ross et al. (Nat Genet., 2000). More information can be obtained at http://genome-www.stanford.edu/nci60/

References

James, G., Witten, D., Hastie, T., and Tibshirani, R. (2013) An Introduction to Statistical Learning with applications in R, www.StatLearning.com, Springer-Verlag, New York

Examples

1
table(NCI60$labs)

Example output

     BREAST         CNS       COLON K562A-repro K562B-repro    LEUKEMIA 
          7           5           7           1           1           6 
MCF7A-repro MCF7D-repro    MELANOMA       NSCLC     OVARIAN    PROSTATE 
          1           1           8           9           6           2 
      RENAL     UNKNOWN 
          9           1 

ISLR documentation built on May 2, 2019, 10:14 a.m.

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