IncucyteDRC: Dose Response Curves from Incucyte Proliferation Assays

Package to import data generated by the Incucyte Zoom from Essen Biosciences and use this to fit dose response curves using the drc package.

AuthorPhil Chapman <phil.chapman@cruk.manchester.ac.uk>
Date of publication2016-04-23 14:21:03
MaintainerPhil Chapman <phil.chapman@cruk.manchester.ac.uk>
LicenseGPL-2
Version0.5.4
https://github.com/chapmandu2/IncucyteDRC

View on CRAN

Functions

calculateCutTimeForGrowthCurve Man page
calculateCutTimeForIDRCSet Man page
calculateDRCData Man page
calculateEC50 Man page
exportDRCDataToDataFrame Man page
exportDRCDataToDotmatics Man page
exportDRCDataToPRISM Man page
exportEC50Data Man page
fitDoseResponseCurve Man page
fitGrowthCurvesGrouped Man page
fitGrowthCurvesIndividual Man page
importIncucyteData Man page
importPlatemap Man page
importPlatemapXML Man page
IncucyteDRC Man page
IncucyteDRC-package Man page
makeIncucyteDRCSet Man page
plotDoseResponseCurve Man page
plotIncucyteDRCSet Man page
plotPlatemap Man page
populateIncucyteDRCSetMetadata Man page
print.IncucyteDRCPlateData Man page
print.IncucyteDRCSet Man page
print.IncucyteDRCSetList Man page
shinyVisApp Man page
shinyVisServer Man page
shinyVisUI Man page
splitIncucyteDRCPlateData Man page

Files

IncucyteDRC
IncucyteDRC/inst
IncucyteDRC/inst/tests
IncucyteDRC/inst/tests/test_importPlatemap.R
IncucyteDRC/inst/extdata
IncucyteDRC/inst/extdata/example_platemap.txt
IncucyteDRC/inst/extdata/example.PlateMap
IncucyteDRC/inst/extdata/example2.PlateMap
IncucyteDRC/inst/extdata/example_data.txt
IncucyteDRC/inst/extdata/example_data2.txt
IncucyteDRC/inst/doc
IncucyteDRC/inst/doc/Overview.R
IncucyteDRC/inst/doc/Overview.html
IncucyteDRC/inst/doc/IncucyteZoomExport.html
IncucyteDRC/inst/doc/IncucyteZoomExport.Rmd
IncucyteDRC/inst/doc/Overview.Rmd
IncucyteDRC/NAMESPACE
IncucyteDRC/R
IncucyteDRC/R/fitDoseResponseCurve.R IncucyteDRC/R/plotPlatemap.R IncucyteDRC/R/importPlatemapXML.R IncucyteDRC/R/aa_globalVars.R IncucyteDRC/R/exportDRCDataToDotmatics.R IncucyteDRC/R/calculateEC50.R IncucyteDRC/R/calculateCutTimeForGrowthCurve.R IncucyteDRC/R/printIncucyteDRCSet.R IncucyteDRC/R/plotIncucyteDRCSet.R IncucyteDRC/R/IncucyteDRC_documentation.R IncucyteDRC/R/printIncucyteDRCPlateData.R IncucyteDRC/R/exportEC50Data.R IncucyteDRC/R/exportDRCDataToDataFrame.R IncucyteDRC/R/makeIncucyteDRCSet.R IncucyteDRC/R/importIncucyteData.R IncucyteDRC/R/exportDRCDataToPRISM.R IncucyteDRC/R/shinyVisUI.R IncucyteDRC/R/printIncucyteDRCSetList.R IncucyteDRC/R/populateIncucyteDRCSetMetadata.R IncucyteDRC/R/plotDoseResponseCurve.R IncucyteDRC/R/splitIncucyteDRCPlateData.R IncucyteDRC/R/importPlatemap.R IncucyteDRC/R/shinyVisApp.R IncucyteDRC/R/fitGrowthCurvesIndividual.R IncucyteDRC/R/calculateCutTimeForIDRCSet.R IncucyteDRC/R/calculateDRCData.R IncucyteDRC/R/fitGrowthCurvesGrouped.R IncucyteDRC/R/shinyVisServer.R
IncucyteDRC/vignettes
IncucyteDRC/vignettes/IncucyteZoomExport1.jpg
IncucyteDRC/vignettes/IncucyteZoomExport.Rmd
IncucyteDRC/vignettes/IncucyteZoomExport2.jpg
IncucyteDRC/vignettes/IncucyteZoomExport3.png
IncucyteDRC/vignettes/Overview.Rmd
IncucyteDRC/README.md
IncucyteDRC/MD5
IncucyteDRC/build
IncucyteDRC/build/vignette.rds
IncucyteDRC/DESCRIPTION
IncucyteDRC/man
IncucyteDRC/man/fitGrowthCurvesIndividual.Rd IncucyteDRC/man/plotPlatemap.Rd IncucyteDRC/man/importIncucyteData.Rd IncucyteDRC/man/calculateCutTimeForGrowthCurve.Rd IncucyteDRC/man/fitDoseResponseCurve.Rd IncucyteDRC/man/exportDRCDataToDataFrame.Rd IncucyteDRC/man/exportDRCDataToDotmatics.Rd IncucyteDRC/man/shinyVisServer.Rd IncucyteDRC/man/calculateEC50.Rd IncucyteDRC/man/plotIncucyteDRCSet.Rd IncucyteDRC/man/populateIncucyteDRCSetMetadata.Rd IncucyteDRC/man/fitGrowthCurvesGrouped.Rd IncucyteDRC/man/print.IncucyteDRCSetList.Rd IncucyteDRC/man/shinyVisUI.Rd IncucyteDRC/man/importPlatemapXML.Rd IncucyteDRC/man/shinyVisApp.Rd IncucyteDRC/man/calculateCutTimeForIDRCSet.Rd IncucyteDRC/man/IncucyteDRC-package.Rd IncucyteDRC/man/exportDRCDataToPRISM.Rd IncucyteDRC/man/print.IncucyteDRCPlateData.Rd IncucyteDRC/man/importPlatemap.Rd IncucyteDRC/man/exportEC50Data.Rd IncucyteDRC/man/plotDoseResponseCurve.Rd IncucyteDRC/man/splitIncucyteDRCPlateData.Rd IncucyteDRC/man/print.IncucyteDRCSet.Rd IncucyteDRC/man/makeIncucyteDRCSet.Rd IncucyteDRC/man/calculateDRCData.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.