splitIncucyteDRCPlateData

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Description

Function to construct a list of IncucyteDRCSet objects from a IncucyteDRCPlateData object.

Usage

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splitIncucyteDRCPlateData(platemap, platedata, group_columns, cut_time = NULL)

Arguments

platemap

Platemap dataframe of the form generated by importPlatemapXML

platedata

IncucyteDRCPlateData object to be split

group_columns

Vector of columns that are present in the data frame to generate the groups.

cut_time

The time at which to extract the data for the dose response curve. Default is NULL.

Value

list of IncucyteDRCSet objects

Examples

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pm_file <- system.file(file='extdata/example.PlateMap', package='IncucyteDRC')
test_pm <- importPlatemapXML(pm_file)
data_file <- system.file(file='extdata/example_data.txt', package='IncucyteDRC')
test_data <- importIncucyteData(data_file, metric='pc')

test_list <- splitIncucyteDRCPlateData(test_pm, test_data, group_columns='growthcondition')

print(test_list)