LDA_plot: LDA_plot

In LDAcoop: Analysis of Data from Limiting Dilution Assay (LDA) with or without Cellular Cooperation

LDA_plot

Description

plot clonogenic activity and survival (at more than one treatment group) for data from limiting dilution assay (LDA) experiments.

Usage

LDA_plot(LDA_tab, uncertainty = "act", xlim = NULL, uncertainty.band = FALSE)

Arguments

LDA_tab	LDA data.frame ("cells", "wells", "positive", "group", "replicate")
uncertainty	method for uncertainty calculation ("act", "ep")
xlim	setting xlim of clonogenic activity plot
uncertainty.band	plotting of uncertainty bands TRUE/FALSE

Value

none

Examples

data(LDAdata)
Z1 <- subset.data.frame(LDAdata,subset = name == unique(LDAdata$name)[1])
LDA_plot(Z1[,c("S-value","# Tested","# Clonal growth","Group","replicate")])

LDAcoop documentation built on Sept. 12, 2024, 7:43 a.m.