Man pages for LEANR
Finds "Local Subnetworks" Within an Interaction Network which Show Enrichment for Differentially Expressed Genes
| CCM.pvals | Gene p-value list derived from knock-out experiments of the... |
| g2 | igraph graph object used in examples for function... |
| gene.annots | Annotation for STRING protein Ids |
| gene.list.scores | Gene p-value list used in examples for function... |
| get.ls.info | Extract the genes of a "local subnetwork"" around a given... |
| g_red | igraph graph object used in unit tests |
| LEANR-package | Finds "local subnetworks" within an interaction network which... |
| pvals_red | Gene p-value list used in unit tests |
| run.lean | Run the LEAN approach |
| subnet.simulation | Simulate subnetworks |
| write.ls.to.sif | Extract the "local subnetwork" around a given protein |
