plotranges: Plots the minimum and maximum and central values

In LIM: Linear Inverse Model Examples and Solution Methods

Plots the minimum and maximum and central values

Description

Plots minimum and maximum ranges.

Takes as input either a lim list, as generated by Setup or a set of vectors specifying the minimum, maximum and the central value, or a data.frame that contains min, max and central values.

Usage

Plotranges(...)
## S3 method for class 'double'
Plotranges(min, max, value = NULL, labels = NULL, log = "",
  pch = 16, pch.col = "black", line.col = "gray", 
  seg.col = "black", xlim = NULL, main = NULL, 
  xlab = NULL, ylab = NULL, lab.cex = 1.0, mark = NULL,...)

## S3 method for class 'lim'
Plotranges(lim = NULL, labels = NULL, type = "X", log = "",
  pch = 16, pch.col = "black", line.col = "gray", 
  seg.col = "black", xlim = NULL, main = NULL, 
  xlab = NULL, ylab = NULL, lab.cex = 1.0, index = NULL, ...)

## S3 method for class 'character'
Plotranges(file, ...)

Arguments

min	minimum value.
max	maximum value.
value	median or mean value.
lim	a list that contains the linear inverse model specification, as generated by function setup.limfile.
file	name of the inverse input file.
labels	names of each value.
type	one of "X" or "V" for plotting of unknowns (X) or variables.
log	if = x: logarithmic scale for x-axis.
pch	pch symbol used for mean value.
pch.col	pch color for mean value.
line.col	color for each variable, spanning x-axis.
seg.col	color for variable range.
xlim	limits on x-axis.
main	main title.
xlab	x-axis label.
ylab	y-axis label.
lab.cex	label expansion value.
index	list of elements to be plotted, a vector of integers; default = all elements.
mark	list of elements to be marked with a "*", i.e. when range is unbounded.
...	arguments passed to R-function "text" when writing labels.

Value

Only when a lim list was inputted. A data frame with

min	the minimum.
max	the maximum.
values	the central value.

Author(s)

Karline Soetaert <[e-mail]>

Examples

# The Takapoto food web.
# some ranges extend to infinity - they are marked with "*"
Plotranges(LIMTakapoto, lab.cex = 0.7, sub = "*=unbounded",
           xlab = "mgC/m2/d",  
           main = "Takapoto atoll planktonic food web, Flowranges")
# ranges of variables, exclude first variable
Plotranges(LIMTakapoto, type = "V", lab.cex = 0.7, 
           index = 2:23, xlab = "mgC/m2/d",
           main = "Takapoto atoll planktonic food web, Variable ranges")

LIM documentation built on May 11, 2022, 5:05 p.m.