LMest: Latent Markov Models with and without Covariates

Fit certain versions of the Latent Markov model for longitudinal categorical data.

Author
Francesco Bartolucci, Silvia Pandolfi - University of Perugia (IT)
Date of publication
2016-08-23 15:25:06
Maintainer
Francesco Bartolucci <bart@stat.unipg.it>
License
GPL (>= 2)
Version
2.3

View on CRAN

Man pages

blkdiag
Build a block diagonal matrix.
bootstrap_lm_basic
Parametric bootstrap for the basic LM model
bootstrap_lm_cov_latent
Parametric bootstrap for LM models with individual covariates...
complk
Complete log-likelihood of the basic latent Markov model
data_criminal_sim
Criminal dataset
data_drug
Dataset about marijuana consumption
data_SRHS_long
Self-reported health status dataset
decoding
Perform local and global decoding
draw_lm_basic
Draw samples from the basic LM model
draw_lm_cov_latent
Draw samples from LM model with covariaates in the latent...
draw_lm_mixed
Draws samples from the mixed LM model
est_lm_basic
Estimate basic LM model
est_lm_cov_latent
Estimate LM model with covariates in the latent model
est_lm_cov_manifest
Estimate LM model with covariates in the measurement model
est_lm_mixed
Estimate mixed LM model
est_multilogit
Estimate multilogit model
expit
Compute the expit function.
expit1
Compute the expit function with respect to a reference...
invglob
Invert vector of global logits.
lk_ar_rho
Compute complete log-likelihood for AR(1) latent process
lk_comp_latent
Complete log-likelihood of the latent Markov model with...
lk_obs
Compute the observable log-likelihood of the basic LM model
lk_obs_latent
Compute the observable log-likelihood of the LM model with...
lk_obs_manifest
Compute the observable log-likelihood of the LM model with...
lk_obs_mixed
Compute the observable log-likelihood of the mixed LM model
lk_sta
Compute the stationary log-likelihood
LMest-package
Fit latent Markov models
logit1
Compute the logit function with respect to a reference...
long2matrices
From data in the long format to data in array format
long2wide
From data in the long format to data in the wide format
marg_param
Compute marginal parametrization
print.LMbasic
Print the output of LMbasic object
print.LMlatent
Print the output of LMlatent object
print.LMmanifest
Print the output of LMmanifest object
print.LMmixed
Print the output of LMmixed object
print.LMsearch
Print the output of LMsearch object
prob_multilogit
Compute multinomial probabilities
prob_post_cov
Compute posterior probabilities.
prod_array
Compute the product of array and vector
rec1
Recursions used by est_lm_cov_manifest
rec3
Recursions used by est_lm_cov_manifest
recursions
Recursions used by est_lm_basic
RLMSdat
Dataset about job satisfaction
search.model.LM
Search for the global maximum of the log-likelihood
sq
Create a matrix with the combination of vectors of (1,0)
stationary
Stationary
summary.LMbasic
Print the output of LMbasic object
summary.LMlatent
Print the output of LMlatent object
summary.LMmanifest
Print the output of LMmanifest object
summary.LMmixed
Print the output of LMmixed object
summary.LMsearch
Print the output of LMsearch object
trans_par
Convert matrix parametrization

Files in this package

LMest
LMest/src
LMest/src/nr_multilogit.f
LMest/src/BWforback.f
LMest/src/for_mult.f
LMest/src/prob_multilogit.f
LMest/src/sum_Y.f
LMest/src/back.f
LMest/NAMESPACE
LMest/data
LMest/data/RLMSdat.rda
LMest/data/data_criminal_sim.rda
LMest/data/data_SRHS_long.rda
LMest/data/data_drug.rda
LMest/R
LMest/R/bootstrap_lm_basic.R
LMest/R/expit1.R
LMest/R/trans_par.R
LMest/R/print.LMbasic.R
LMest/R/est_lm_basic.R
LMest/R/print.LMmixed.R
LMest/R/summary.LMlatent.R
LMest/R/search.model.LM.R
LMest/R/complk.R
LMest/R/logit1.R
LMest/R/decoding.R
LMest/R/lk_obs_manifest.R
LMest/R/recursions.R
LMest/R/draw_lm_basic.R
LMest/R/prob_multilogit.R
LMest/R/lk_comp_latent.R
LMest/R/marg_param.R
LMest/R/est_lm_cov_manifest.R
LMest/R/summary.LMmanifest.R
LMest/R/draw_lm_mixed.R
LMest/R/draw_lm_cov_latent.R
LMest/R/summary.LMbasic.R
LMest/R/print.LMsearch.R
LMest/R/lk_ar_rho.R
LMest/R/est_lm_cov_latent.R
LMest/R/print.LMlatent.R
LMest/R/bootstrap_lm_cov_latent.R
LMest/R/invglob.R
LMest/R/sq.R
LMest/R/expit.R
LMest/R/print.LMmanifest.R
LMest/R/lk_obs_latent.R
LMest/R/lk_obs.R
LMest/R/summary.LMmixed.R
LMest/R/prod_array.R
LMest/R/summary.LMsearch.R
LMest/R/rec3.R
LMest/R/stationary.R
LMest/R/est_lm_mixed.R
LMest/R/rec1.R
LMest/R/prob_post_cov.R
LMest/R/lk_sta.R
LMest/R/est_multilogit.R
LMest/R/long2wide.R
LMest/R/blkdiag.R
LMest/R/lk_obs_mixed.R
LMest/R/long2matrices.R
LMest/MD5
LMest/DESCRIPTION
LMest/man
LMest/man/bootstrap_lm_basic.Rd
LMest/man/draw_lm_basic.Rd
LMest/man/lk_obs_mixed.Rd
LMest/man/summary.LMbasic.Rd
LMest/man/draw_lm_mixed.Rd
LMest/man/summary.LMlatent.Rd
LMest/man/prod_array.Rd
LMest/man/marg_param.Rd
LMest/man/RLMSdat.Rd
LMest/man/lk_comp_latent.Rd
LMest/man/blkdiag.Rd
LMest/man/long2matrices.Rd
LMest/man/LMest-package.Rd
LMest/man/prob_post_cov.Rd
LMest/man/decoding.Rd
LMest/man/rec1.Rd
LMest/man/invglob.Rd
LMest/man/est_lm_cov_latent.Rd
LMest/man/summary.LMmanifest.Rd
LMest/man/est_lm_cov_manifest.Rd
LMest/man/est_lm_basic.Rd
LMest/man/draw_lm_cov_latent.Rd
LMest/man/print.LMlatent.Rd
LMest/man/recursions.Rd
LMest/man/rec3.Rd
LMest/man/data_SRHS_long.Rd
LMest/man/complk.Rd
LMest/man/stationary.Rd
LMest/man/prob_multilogit.Rd
LMest/man/sq.Rd
LMest/man/print.LMsearch.Rd
LMest/man/expit.Rd
LMest/man/print.LMmanifest.Rd
LMest/man/data_criminal_sim.Rd
LMest/man/lk_sta.Rd
LMest/man/bootstrap_lm_cov_latent.Rd
LMest/man/logit1.Rd
LMest/man/lk_ar_rho.Rd
LMest/man/print.LMbasic.Rd
LMest/man/summary.LMsearch.Rd
LMest/man/lk_obs.Rd
LMest/man/est_lm_mixed.Rd
LMest/man/summary.LMmixed.Rd
LMest/man/long2wide.Rd
LMest/man/lk_obs_latent.Rd
LMest/man/print.LMmixed.Rd
LMest/man/est_multilogit.Rd
LMest/man/search.model.LM.Rd
LMest/man/trans_par.Rd
LMest/man/lk_obs_manifest.Rd
LMest/man/data_drug.Rd
LMest/man/expit1.Rd