This package contains the functions necessary to run the LOGICOIL algorithm. LOGICOIL can be used to differentiate between antiparallel dimers, parallel dimers, trimers and higher-order coiled-coil sequence. By covering >90 percent of the known coiled-coil structures, LOGICOIL is a net improvement compared with other existing methods, which achieve a predictive coverage of around 31 percent of this population. As such, LOGICOIL is particularly useful for researchers looking to characterize novel coiled-coil sequences or studying coiled-coil containing protein assemblies. It may also be used to assist in the structural characterization of synthetic coiled-coil sequences.
|Author||Thomas L. Vincent <[email protected]>, Peter J. Green and Derek N. Woolfson <[email protected]>|
|Date of publication||2014-04-14 00:04:00|
|Maintainer||Thomas L. Vincent <[email protected]>|
|License||GPL (>= 2)|
|Package repository||View on CRAN|
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