LOGICOIL: LOGICOIL: multi-state prediction of coiled-coil oligomeric state.

This package contains the functions necessary to run the LOGICOIL algorithm. LOGICOIL can be used to differentiate between antiparallel dimers, parallel dimers, trimers and higher-order coiled-coil sequence. By covering >90 percent of the known coiled-coil structures, LOGICOIL is a net improvement compared with other existing methods, which achieve a predictive coverage of around 31 percent of this population. As such, LOGICOIL is particularly useful for researchers looking to characterize novel coiled-coil sequences or studying coiled-coil containing protein assemblies. It may also be used to assist in the structural characterization of synthetic coiled-coil sequences.

Package details

AuthorThomas L. Vincent <tlfvincent@gmail.com>, Peter J. Green and Derek N. Woolfson <D.N.Woolfson@bristol.ac.uk>
MaintainerThomas L. Vincent <tlfvincent@gmail.com>
LicenseGPL (>= 2)
URL http://coiledcoils.chm.bris.ac.uk/LOGICOIL
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:

Try the LOGICOIL package in your browser

Any scripts or data that you put into this service are public.

LOGICOIL documentation built on May 2, 2019, 9:09 a.m.