LOGICOIL: LOGICOIL: multi-state prediction of coiled-coil oligomeric state.
Version 0.99.0

This package contains the functions necessary to run the LOGICOIL algorithm. LOGICOIL can be used to differentiate between antiparallel dimers, parallel dimers, trimers and higher-order coiled-coil sequence. By covering >90 percent of the known coiled-coil structures, LOGICOIL is a net improvement compared with other existing methods, which achieve a predictive coverage of around 31 percent of this population. As such, LOGICOIL is particularly useful for researchers looking to characterize novel coiled-coil sequences or studying coiled-coil containing protein assemblies. It may also be used to assist in the structural characterization of synthetic coiled-coil sequences.

Package details

AuthorThomas L. Vincent <[email protected]>, Peter J. Green and Derek N. Woolfson <[email protected]>
Date of publication2014-04-14 00:04:00
MaintainerThomas L. Vincent <[email protected]>
LicenseGPL (>= 2)
Version0.99.0
URL http://coiledcoils.chm.bris.ac.uk/LOGICOIL
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("LOGICOIL")

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LOGICOIL documentation built on May 29, 2017, 11:20 p.m.