Man pages for LUCIDus
LUCID with Multiple Omics Data
| boot_lucid | Inference of LUCID model based on bootstrap resampling |
| check_na | Check missing patterns in one layer of omics data Z |
| estimate_lucid | Fit LUCID models with one or multiple omics layers |
| fill_data | Impute missing data by optimizing the likelihood function |
| gen_ci | generate bootstrp ci (normal, basic and percentile) |
| Istep_Z | I-step of LUCID |
| lucid | Fit a lucid model for integrated analysis on exposure,... |
| plot | Visualize LUCID model through a Sankey diagram |
| predict_lucid | Predict cluster assignment and outcome based on LUCID model... |
| print.sumlucid_early | Print the output of LUCID in a nicer table |
| print.sumlucid_parallel | Print the output of LUCID in a nicer table |
| print.sumlucid_serial | Print the output of LUCID in a nicer table |
| sim_data | A simulated dataset for LUCID |
| simulated_HELIX_data | A simulated HELIX dataset for LUCID |
| summary.early_lucid | Summarize results of the early LUCID model |
| summary.lucid_parallel | Summarize results of the parallel LUCID model |
| summary.lucid_serial | Summarize results of the serial LUCID model |
| tune_lucid | A wrapper function to perform model selection for LUCID |
