summary.lucid_serial: Summarize results of the serial LUCID model

In LUCIDus: LUCID with Multiple Omics Data

Summarize results of the serial LUCID model

Description

Summarize results of the serial LUCID model

Usage

## S3 method for class 'lucid_serial'
summary(object, ...)

Arguments

object	A LUCID model fitted by estimate_lucid
...	Additional arguments. boot.se accepts an object returned by boot_lucid, whose confidence limits are then shown alongside the point estimates. auto_print = FALSE suppresses printing.

Value

A list of class sumlucid_serial with components:

BIC, loglik

Assembled over the whole serial model, and repeated inside model_fit.

model_info

The outcome family, n_observations, n_stages, stage_type (whether each stage is an "early" or a "parallel" sub-model) and stage_K, the clusters per stage.

regularization

The penalties in force, or NULL if none.

missing_data

n_stages and a per-stage breakdown.

stage_summary

The heart of the object: one summary per stage, each with the same shape as the corresponding early or parallel summary. Outcome parameters appear on the final stage, the only one the outcome enters.

transition

How consecutive stages connect: labels names the previous stage's clusters as they enter the next stage's design, and prev_stage_type records that stage's type. The first element is empty, the first stage having no predecessor.

boot.se

The boot.se argument as supplied, or NULL.

summary.list

A legacy alias of stage_summary, retained for downstream code written before the rename. Prefer stage_summary.

Returned invisibly when printed.

LUCIDus documentation built on Sept. 3, 2026, 1:06 a.m.