getInclusionList: Obtain an inclusion list from the annotation results

In LipidMS: Lipid Annotation for LC-MS/MS DDA or DIA Data

Obtain an inclusion list from the annotation results

Description

Obtain an inclusion list for the identified lipids.

Usage

getInclusionList(df, dbs)

Arguments

df	data frame. Output of identification functions (results table from an msobject or feature table from an msbatch).
dbs	list of data bases required for annotation. By default, dbs contains the required data frames based on the default fragmentation rules. If these rules are modified, dbs may need to be supplied. See createLipidDB and assignDB.

Value

Data frame with 6 columns: formula, RT, neutral mass, m/z, adduct and the LipidMSid.

Author(s)

M Isabel Alcoriza-Balaguer <[e-mail]>

LipidMS documentation built on March 18, 2022, 7:14 p.m.