LocaTT: Geographically-Conscious Taxonomic Assignment for Metabarcoding

A bioinformatics pipeline for performing taxonomic assignment of DNA metabarcoding sequence data while considering geographic location. A detailed tutorial is available at <https://urodelan.github.io/Local_Taxa_Tool_Tutorial/>. A manuscript describing these methods is in preparation.

Getting started

Package details

AuthorKenen Goodwin [aut, cre] (<https://orcid.org/0000-0002-9219-7693>), Taal Levi [aut]
MaintainerKenen Goodwin <urodelan@gmail.com>
LicenseGPL (>= 3)
Version1.1.1
URL https://github.com/Urodelan/LocaTT
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("LocaTT")

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LocaTT documentation built on Nov. 2, 2023, 6:09 p.m.