API for LocaTT
Geographically-Conscious Taxonomic Assignment for Metabarcoding

Global functions
.onAttach	Source code
adjust_taxonomies	Man page Source code
binomial_test	Man page Source code
blast_command_found	Man page Source code
blast_version	Man page Source code
circle	Man page Source code
contains_wildcards	Man page Source code
coordinates	Man page Source code
cor2cov	Man page Source code
dcopula	Man page Source code
ddirmult	Man page Source code
decode_quality_scores	Man page Source code
detection	Man page Source code
dissimilarity	Man page Source code
diversity	Man page Source code
djsdm	Man page Source code
dmWAIC	Man page Source code
dmpredict	Man page Source code
dmreg	Man page Source code
dmvlogis	Man page Source code
expand_taxonomies	Man page Source code
filter_sequences	Man page Source code
format_reference_database	Man page Source code
get_consensus_taxonomy	Man page Source code
get_taxonomic_level	Man page Source code
get_taxonomies.IUCN	Man page Source code
get_taxonomies.species_binomials	Man page Source code
isolate_amplicon	Man page Source code
local_taxa_tool	Man page Source code
merge_pairs	Man page Source code
mlWAIC	Man page Source code
mlcoef	Man page Source code
mlcor	Man page Source code
mlformat	Man page Source code
mlpredict	Man page Source code
mlreg	Man page Source code
normalize	Man page Source code
proportion	Man page Source code
read.fasta	Man page Source code
read.fastq	Man page Source code
reverse_complement	Man page Source code
richness	Man page Source code
sector	Man page Source code
singular.detection	Man page Source code
singular.proportion	Man page Source code
softmax	Man page Source code
substitute_wildcards	Man page Source code
summarize_quality_scores	Man page Source code
template	Man page Source code
trim_sequences	Man page Source code
truncate_and_merge_pairs	Man page Source code
truncate_sequences.length	Man page Source code
truncate_sequences.probability	Man page Source code
truncate_sequences.quality_score	Man page Source code
waic	Man page Source code
write.fasta	Man page Source code
write.fastq	Man page Source code