substitute_wildcards: Substitute Wildcard Characters in a DNA Sequence
In LocaTT: Geographically-Conscious Taxonomic Assignment for Metabarcoding
View source: R/substitute_wildcards.R
substitute_wildcards R Documentation
Substitute Wildcard Characters in a DNA Sequence
Description
Substitutes wildcard characters in a DNA sequence with their associated nucleotides surrounded by square brackets. The output is useful for matching in regular expressions.
Usage
substitute_wildcards(sequence)
Arguments
sequence
A string specifying the DNA sequence containing wildcard characters.
Value
A string of the DNA sequence in which wildcard characters are replaced with their associated nucleotides surrounded by square brackets.
Examples
substitute_wildcards(sequence="CAADATCCGCGGSTGGAGAA")
LocaTT documentation built on Nov. 2, 2023, 6:09 p.m.
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View source: R/substitute_wildcards.R
| substitute_wildcards | R Documentation |
Substitute Wildcard Characters in a DNA Sequence
Description
Substitutes wildcard characters in a DNA sequence with their associated nucleotides surrounded by square brackets. The output is useful for matching in regular expressions.
Usage
substitute_wildcards(sequence)
Arguments
sequence |
A string specifying the DNA sequence containing wildcard characters. |
Value
A string of the DNA sequence in which wildcard characters are replaced with their associated nucleotides surrounded by square brackets.
Examples
substitute_wildcards(sequence="CAADATCCGCGGSTGGAGAA")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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