API for LocaTT
Geographically-Conscious Taxonomic Assignment for Metabarcoding
| Global functions | |
|---|---|
| .onAttach | Source code |
| binomial_test | Man page Source code |
| blast_command_found | Man page Source code |
| blast_version | Man page Source code |
| contains_wildcards | Man page Source code |
| decode_quality_scores | Man page Source code |
| format_reference_database | Man page Source code |
| get_consensus_taxonomy | Man page Source code |
| get_taxonomic_level | Man page Source code |
| get_taxonomies.IUCN | Man page Source code |
| get_taxonomies.species_binomials | Man page Source code |
| isolate_amplicon | Man page Source code |
| local_taxa_tool | Man page Source code |
| merge_pairs | Man page Source code |
| read.fasta | Man page Source code |
| read.fastq | Man page Source code |
| reverse_complement | Man page Source code |
| substitute_wildcards | Man page Source code |
| trim_sequences | Man page Source code |
| truncate_sequences.length | Man page Source code |
| truncate_sequences.probability | Man page Source code |
| truncate_sequences.quality_score | Man page Source code |
| write.fasta | Man page Source code |
| write.fastq | Man page Source code |
