Man pages for MALDIquant
Quantitative Analysis of Mass Spectrometry Data

AbstractMassObject-classClass "AbstractMassObject"
alignSpectra-functionsAlign MassSpectrum objects.
averageMassSpectra-functionsAverages 'MassSpectrum' objects.
binPeaks-functionsAlign Peaks into discrete bins.
calibrateIntensity-methodsCalibrates intensities of a MassSpectrum object.
createMassPeaks-functionsCreates a MassPeaks object.
createMassSpectrum-functionsCreates a MassSpectrum object.
detectPeaks-methodsDetects peaks in a MassSpectrum object.
determineWarpingFunctions-functionsDetermine warping functions of MassPeaks objects.
estimateBaseline-methodsEstimates the baseline of a MassSpectrum object.
estimateNoise-methodsEstimates the noise of a MassSpectrum object.
fiedler2009subsetExample Mass Spectra (raw)
filterPeaks-functionsRemoves less frequent peaks.
findEmptyMassObjects-functionsFinds or removes empty AbstractMassObject objects in a list.
intensityMatrix-functionsConverts a list of MassPeaks objects into a matrix.
isMassObject-functionsTests for MassSpectrum or MassPeaks object.
isMassObjectList-functionsTests a list of MassSpectrum or MassPeaks objects.
labelPeaks-methodsDraws peak labels to plot.
MALDIquant-defunctRemoved Functions/Methods in Package 'MALDIquant'
MALDIquant-deprecatedDeprecated Functions/Methods in Package 'MALDIquant'
MALDIquant-packageQuantitative Analysis of Mass Spectrometry Data
MALDIquant-parallelParallel Support in Package 'MALDIquant'
MassPeaks-classClass "MassPeaks"
MassSpectrum-classClass "MassSpectrum"
match.closestRelaxed Value Matching
mergeMassPeaks-functionsMerges 'MassPeaks' objects.
monoisotopicPeaks-methodsFinds monoisotopic peaks in a MassPeaks object.
msiSlices-functionsTurn a list of AbstractMassObjects into a mass spectrometry...
plot-methodsPlots an AbstractMassObject object.
plotMsiSlice-methodsPlots a Mass Spectrometry Imaging dataset.
referencePeaks-functionsCreates a reference 'MassPeaks' object.
removeBaseline-methodsRemoves the baseline of a MassSpectrum object.
smoothIntensity-methodsSmoothes intensities of a MassSpectrum object.
transformIntensity-methodsTransforms intensities of an AbstractMassObject object.
trim-methodsTrim an AbstractMassObject object.
warp-functionsRun warping functions on AbstractMassObject objects.
MALDIquant documentation built on July 7, 2018, 1:02 a.m.