minp: P-values adjustment in permutation
In MAVTgsa: Three methods to identify differentially expressed gene sets, ordinary least square test, Multivariate Analysis Of Variance test with n contrasts and Random forest.
Description
Usage
Arguments
Value
Description
Returns the p-values in each permutation.
Usage
1
Arguments
p
input p-values.
rank
the rank of the p-values.
n.GeneSets
the number of genes in a given gene set.
nbPerm
the number of permutation times.
Value
a permutation p-value matrix.
MAVTgsa documentation built on May 2, 2019, 6:37 a.m.
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Description Usage Arguments Value
Description
Returns the p-values in each permutation.
Usage
1 |
Arguments
p |
input p-values. |
rank |
the rank of the p-values. |
n.GeneSets |
the number of genes in a given gene set. |
nbPerm |
the number of permutation times. |
Value
a permutation p-value matrix.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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