MESS: Miscellaneous Esoteric Statistical Scripts
Version 0.4-15

A mixed collection of useful and semi-useful diverse statistical functions, some of which may even be referenced in The R Primer book.

Browse man pages Browse package API and functions Browse package files

AuthorClaus Thorn Ekstrøm <claus@rprimer.dk>
Date of publication2017-04-09 22:33:27 UTC
MaintainerClaus Ekstrøm <claus@rprimer.dk>
LicenseGPL-2
Version0.4-15
URL https://github.com/ekstroem/MESS
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("MESS")

Man pages

adaptive.weights: Compute weights for use with adaptive lasso.
age: Compute the age of a person from two dates.
auc: Compute the area under the curve for two vectors.
bdstat: Danish live births and deaths
bees: Bee data. Number of different types of bees caught.
categorize: A table function to use with magrittr pipes
clotting: Blood clotting for 158 rats
cmd: Correlation matrix distance
col.alpha: Add and set alpha channel for RGB color
col.shade: Shade an RGB color
col.tint: Tint an RGB color
common.shared: Compute a common shared environment matrix
drop1.geeglm: Drop All Possible Single Terms to a geeglm Model Using Wald...
drop1.geem: Drop All Possible Single Terms to a geem Model Using Wald or...
earthquakes: Earthquakes in 2015
expand_table: Expand table or matrix to data frame
extended.shared: Compute a common shared environment matrix
fac2num: Convert factor to numeric vector
feature.test: Inference for features identified by the Lasso
filldown: Fill down NA with the last observed observation
geekin: Fit a generalized estimating equation (GEE) model with fixed...
gkgamma: Goodman-Kruskal's gamma statistic for a two-dimensional table
greenland: Average yearly summer air temperature for Tasiilaq, Greenland
happiness: Happiness score and tax rates for 148 countries
ht: Show the head and tail of an object
icecreamads: Ice cream consumption and advertising
kwdata: Non-parametric Kruskal Wallis data example
lifeexpect: Estimated life expectancy for Danish newborns
lower.tri.vector: Split Matrix by Clusters and Return Lower Triangular Parts as...
matched: Flu hospitalization
MESS: Collection of miscellaneous useful and semi-useful functions
mfastLmCpp: Fast marginal simple regresion analyses
nh4: Ammonia nitrogen found in river
onemargintest: Two-sided table test with fixed margins
ordered.clusters: Check if unique elements of a vector appear in contiguous...
panel.hist: Panel plot of histogram and density curve
panel.r2: Panel plot of R2 values for pairs
picea: Ozone concentration damage to picea spruce
power_binom_test: Power Calculations for Exact Test of a simple null hypothesis...
power_mcnemar_test: Power Calculations for Exact and Asymptotic McNemar Test in a...
power_t_test: Power calculations for one and two sample t tests with...
prepost.test: Pretest-posttest RCT for quantitative observations with...
qdiag: Fast extraction of matrix diagonal
QIC: Quasi Information Criterion
qpcr: Gene expression from real-time quantitative PCR
quadform: Fast quadratic form computation
rainman: Perception of points in a swarm
repmat: Fast replication of a matrix
residualplot: Plots a standardaized residual
rmvtnorm.pedigree: Simulate residual multivariate Gaussian data from a polygenic...
rmvt.pedigree: Simulate residual multivariate t-distributed data from a...
rootonorm: Hanging rootogram for normal distribution
round_percent: Round vector of number to percentages
scorefct: Internal functions for the MESS package
screen_variables: Screen variable before penalized regression
segregate.genes: Segregate genes through a pedigree
sinv: Invert a symmetric positive-definite matrix
smokehealth: Effect of smoking on self reported health
soccer: Danish national soccer players
superroot2: Gene expression data from two-color dye-swap experiment
tracemp: Fast computation of trace of matrix product
wallyplot: Plots a Wally plot
write.xml: Write a data frame in XML format

Functions

MESS Man page
MESS-package Man page Man page
QIC Man page Man page Source code
QIC.geeglm Man page Source code
QIC.geekin Man page Man page Source code
QIC.ordgee Man page Man page Source code
adaptive.weights Man page Source code
age Man page Source code
auc Man page Source code
bdstat Man page
bees Man page
categorize Man page Source code
clotting Man page
cmd Man page Source code
col.alpha Man page Source code
col.shade Man page Source code
col.tint Man page Source code
common.shared Man page Source code
common.shared.pedigree Man page Source code
common.shared.pedigreeList Man page Source code
drop1.geeglm Man page Source code
drop1.geem Man page Source code
drop1.geese Source code
earthquakes Man page
expand_table Man page Source code
extended.shared Man page Source code
extended.shared.pedigree Man page Source code
extended.shared.pedigreeList Man page Source code
fac2num Man page Source code
feature.test Man page Source code
filldown Man page Source code
fitted.geese Source code
geekin Man page Source code
gkgamma Man page Source code
greenland Man page
happiness Man page
ht Man page Source code
icecreamads Man page
kwdata Man page
lifeexpect Man page
lower.tri.vector Man page Source code
matched Man page
mfastLmCpp Man page Source code
nh4 Man page
onemargintest Man page Source code
orcor Source code
ordered.clusters Man page Source code
panel.hist Man page Source code
panel.r2 Man page Source code
picea Man page
plot3x3 Source code
power_binom_test Man page Source code
power_mcnemar_test Man page Source code
power_t_test Man page Source code
prepost.test Man page Source code
print.geekin Man page Source code
qdiag Man page Source code
qpcr Man page
quadform Man page Source code
rainman Man page
repmat Man page Source code
residualplot Man page Source code
residualplot.default Man page Man page Source code
residualplot.lm Man page Man page Source code
rmvt.pedigree Man page Source code
rmvtnorm.pedigree Man page Source code
rootogram Man page
rootonorm Man page Source code
round_percent Man page Source code
scorefct Man page Source code
screen_variables Man page Source code
segregate.genes Man page Source code
sinv Man page Source code
smokehealth Man page
soccer Man page
superroot2 Man page
tracemp Man page Source code
wallyplot Man page Source code
wallyplot.default Man page Man page Source code
wallyplot.lm Man page Man page Source code
write.xml Man page Source code

Files

inst
inst/extdata
inst/extdata/swarms.pdf
inst/extdata/mydata.xml
inst/doc
inst/doc/MESS.Rmd
inst/doc/MESS.html
src
src/Makevars
src/qdiag.cpp
src/repmat.cpp
src/onemargin.cpp
src/quadforms.cpp
src/filldown.cpp
src/mfastLm.cpp
src/trace.cpp
src/Makevars.win
src/RcppExports.cpp
src/cmd.cpp
src/MESS_init.c
NAMESPACE
data
data/bdstat.rda
data/clotting.RData
data/rainman.rda
data/earthquakes.rda
data/kwdata.rda
data/picea.rda
data/qpcr.rda
data/superroot2.rda
data/smokehealth.rda
data/happiness.rda
data/datalist
data/nh4.rda
data/icecreamads.rda
data/soccer.rda
data/lifeexpect.rda
data/greenland.rda
data/bees.rda
data/matched.rda
R
R/ht.R
R/categorize.R
R/panel.R
R/feature.test.R
R/rootonorm.R
R/qic.R
R/rmvtnorm.pedigree.R
R/fitted.geese.R
R/wallyplot.R
R/ordered.clusters.R
R/age.R
R/fac2num.R
R/colorfunctions.R
R/power.mcnemar.test.R
R/common.shared.R
R/writexml.R
R/geekin.R
R/residualplot.R
R/sinv.R
R/lower.tri.vector.R
R/prepost.R
R/RcppExports.R
R/power.binom.test.R
R/segregate.genes.R
R/round_percent.R
R/orcor.r
R/MESS-package.R
R/drop1.geeglm.R
R/screener.R
R/expand.R
R/adaptive.weights.R
R/power.t.test.R
R/auc.R
R/scorefct.R
R/extended.shared.R
R/gkgamma.R
vignettes
vignettes/MESS.Rmd
README.md
MD5
build
build/vignette.rds
DESCRIPTION
man
man/power_mcnemar_test.Rd
man/rootonorm.Rd
man/filldown.Rd
man/categorize.Rd
man/clotting.Rd
man/qpcr.Rd
man/panel.hist.Rd
man/col.tint.Rd
man/rmvt.pedigree.Rd
man/soccer.Rd
man/repmat.Rd
man/picea.Rd
man/lower.tri.vector.Rd
man/residualplot.Rd
man/drop1.geem.Rd
man/ordered.clusters.Rd
man/fac2num.Rd
man/lifeexpect.Rd
man/col.alpha.Rd
man/feature.test.Rd
man/panel.r2.Rd
man/cmd.Rd
man/MESS.Rd
man/screen_variables.Rd
man/matched.Rd
man/quadform.Rd
man/rainman.Rd
man/drop1.geeglm.Rd
man/power_binom_test.Rd
man/ht.Rd
man/sinv.Rd
man/auc.Rd
man/superroot2.Rd
man/scorefct.Rd
man/bees.Rd
man/expand_table.Rd
man/QIC.Rd
man/round_percent.Rd
man/adaptive.weights.Rd
man/gkgamma.Rd
man/rmvtnorm.pedigree.Rd
man/wallyplot.Rd
man/kwdata.Rd
man/greenland.Rd
man/smokehealth.Rd
man/icecreamads.Rd
man/col.shade.Rd
man/segregate.genes.Rd
man/age.Rd
man/prepost.test.Rd
man/earthquakes.Rd
man/bdstat.Rd
man/tracemp.Rd
man/mfastLmCpp.Rd
man/extended.shared.Rd
man/write.xml.Rd
man/common.shared.Rd
man/geekin.Rd
man/power_t_test.Rd
man/happiness.Rd
man/nh4.Rd
man/onemargintest.Rd
man/qdiag.Rd
MESS documentation built on May 19, 2017, 11:55 a.m.