MESS: Miscellaneous Esoteric Statistical Scripts

A mixed collection of useful and semi-useful diverse statistical functions, some of which may even be referenced in The R Primer book.

Install the latest version of this package by entering the following in R:
install.packages("MESS")
AuthorClaus Thorn Ekstrøm <claus@rprimer.dk>
Date of publication2017-04-09 22:33:27 UTC
MaintainerClaus Ekstrøm <claus@rprimer.dk>
LicenseGPL-2
Version0.4-15
https://github.com/ekstroem/MESS

View on CRAN

Man pages

adaptive.weights: Compute weights for use with adaptive lasso.

age: Compute the age of a person from two dates.

auc: Compute the area under the curve for two vectors.

bdstat: Danish live births and deaths

bees: Bee data. Number of different types of bees caught.

categorize: A table function to use with magrittr pipes

clotting: Blood clotting for 158 rats

cmd: Correlation matrix distance

col.alpha: Add and set alpha channel for RGB color

col.shade: Shade an RGB color

col.tint: Tint an RGB color

common.shared: Compute a common shared environment matrix

drop1.geeglm: Drop All Possible Single Terms to a geeglm Model Using Wald...

drop1.geem: Drop All Possible Single Terms to a geem Model Using Wald or...

earthquakes: Earthquakes in 2015

expand_table: Expand table or matrix to data frame

extended.shared: Compute a common shared environment matrix

fac2num: Convert factor to numeric vector

feature.test: Inference for features identified by the Lasso

filldown: Fill down NA with the last observed observation

geekin: Fit a generalized estimating equation (GEE) model with fixed...

gkgamma: Goodman-Kruskal's gamma statistic for a two-dimensional table

greenland: Average yearly summer air temperature for Tasiilaq, Greenland

happiness: Happiness score and tax rates for 148 countries

ht: Show the head and tail of an object

icecreamads: Ice cream consumption and advertising

kwdata: Non-parametric Kruskal Wallis data example

lifeexpect: Estimated life expectancy for Danish newborns

lower.tri.vector: Split Matrix by Clusters and Return Lower Triangular Parts as...

matched: Flu hospitalization

MESS: Collection of miscellaneous useful and semi-useful functions

mfastLmCpp: Fast marginal simple regresion analyses

nh4: Ammonia nitrogen found in river

onemargintest: Two-sided table test with fixed margins

ordered.clusters: Check if unique elements of a vector appear in contiguous...

panel.hist: Panel plot of histogram and density curve

panel.r2: Panel plot of R2 values for pairs

picea: Ozone concentration damage to picea spruce

power_binom_test: Power Calculations for Exact Test of a simple null hypothesis...

power_mcnemar_test: Power Calculations for Exact and Asymptotic McNemar Test in a...

power_t_test: Power calculations for one and two sample t tests with...

prepost.test: Pretest-posttest RCT for quantitative observations with...

qdiag: Fast extraction of matrix diagonal

QIC: Quasi Information Criterion

qpcr: Gene expression from real-time quantitative PCR

quadform: Fast quadratic form computation

rainman: Perception of points in a swarm

repmat: Fast replication of a matrix

residualplot: Plots a standardaized residual

rmvtnorm.pedigree: Simulate residual multivariate Gaussian data from a polygenic...

rmvt.pedigree: Simulate residual multivariate t-distributed data from a...

rootonorm: Hanging rootogram for normal distribution

round_percent: Round vector of number to percentages

scorefct: Internal functions for the MESS package

screen_variables: Screen variable before penalized regression

segregate.genes: Segregate genes through a pedigree

sinv: Invert a symmetric positive-definite matrix

smokehealth: Effect of smoking on self reported health

soccer: Danish national soccer players

superroot2: Gene expression data from two-color dye-swap experiment

tracemp: Fast computation of trace of matrix product

wallyplot: Plots a Wally plot

write.xml: Write a data frame in XML format

Functions

adaptive.weights Man page
age Man page
auc Man page
bdstat Man page
bees Man page
categorize Man page
clotting Man page
cmd Man page
col.alpha Man page
col.shade Man page
col.tint Man page
common.shared Man page
common.shared.pedigree Man page
common.shared.pedigreeList Man page
drop1.geeglm Man page
drop1.geem Man page
earthquakes Man page
expand_table Man page
extended.shared Man page
extended.shared.pedigree Man page
extended.shared.pedigreeList Man page
fac2num Man page
feature.test Man page
filldown Man page
geekin Man page
gkgamma Man page
greenland Man page
happiness Man page
ht Man page
icecreamads Man page
kwdata Man page
lifeexpect Man page
lower.tri.vector Man page
matched Man page
MESS Man page
MESS-package Man page
mfastLmCpp Man page
nh4 Man page
onemargintest Man page
ordered.clusters Man page
panel.hist Man page
panel.r2 Man page
picea Man page
power_binom_test Man page
power_mcnemar_test Man page
power_t_test Man page
prepost.test Man page
print.geekin Man page
qdiag Man page
QIC Man page
QIC.geeglm Man page
QIC.geekin Man page
QIC.ordgee Man page
qpcr Man page
quadform Man page
rainman Man page
repmat Man page
residualplot Man page
residualplot.default Man page
residualplot.lm Man page
rmvtnorm.pedigree Man page
rmvt.pedigree Man page
rootogram Man page
rootonorm Man page
round_percent Man page
scorefct Man page
screen_variables Man page
segregate.genes Man page
sinv Man page
smokehealth Man page
soccer Man page
superroot2 Man page
tracemp Man page
wallyplot Man page
wallyplot.default Man page
wallyplot.lm Man page
write.xml Man page

Files

inst
inst/extdata
inst/extdata/swarms.pdf
inst/extdata/mydata.xml
inst/doc
inst/doc/MESS.Rmd
inst/doc/MESS.html
src
src/Makevars
src/qdiag.cpp
src/repmat.cpp
src/onemargin.cpp
src/quadforms.cpp
src/filldown.cpp
src/mfastLm.cpp
src/trace.cpp
src/Makevars.win
src/RcppExports.cpp
src/cmd.cpp
src/MESS_init.c
NAMESPACE
data
data/bdstat.rda
data/clotting.RData
data/rainman.rda
data/earthquakes.rda
data/kwdata.rda
data/picea.rda
data/qpcr.rda
data/superroot2.rda
data/smokehealth.rda
data/happiness.rda
data/datalist
data/nh4.rda
data/icecreamads.rda
data/soccer.rda
data/lifeexpect.rda
data/greenland.rda
data/bees.rda
data/matched.rda
R
R/ht.R R/categorize.R R/panel.R R/feature.test.R R/rootonorm.R R/qic.R R/rmvtnorm.pedigree.R R/fitted.geese.R R/wallyplot.R R/ordered.clusters.R R/age.R R/fac2num.R R/colorfunctions.R R/power.mcnemar.test.R R/common.shared.R R/writexml.R R/geekin.R R/residualplot.R R/sinv.R R/lower.tri.vector.R R/prepost.R R/RcppExports.R R/power.binom.test.R R/segregate.genes.R R/round_percent.R R/orcor.r R/MESS-package.R R/drop1.geeglm.R R/screener.R R/expand.R R/adaptive.weights.R R/power.t.test.R R/auc.R R/scorefct.R R/extended.shared.R R/gkgamma.R
vignettes
vignettes/MESS.Rmd
README.md
MD5
build
build/vignette.rds
DESCRIPTION
man
man/power_mcnemar_test.Rd man/rootonorm.Rd man/filldown.Rd man/categorize.Rd man/clotting.Rd man/qpcr.Rd man/panel.hist.Rd man/col.tint.Rd man/rmvt.pedigree.Rd man/soccer.Rd man/repmat.Rd man/picea.Rd man/lower.tri.vector.Rd man/residualplot.Rd man/drop1.geem.Rd man/ordered.clusters.Rd man/fac2num.Rd man/lifeexpect.Rd man/col.alpha.Rd man/feature.test.Rd man/panel.r2.Rd man/cmd.Rd man/MESS.Rd man/screen_variables.Rd man/matched.Rd man/quadform.Rd man/rainman.Rd man/drop1.geeglm.Rd man/power_binom_test.Rd man/ht.Rd man/sinv.Rd man/auc.Rd man/superroot2.Rd man/scorefct.Rd man/bees.Rd man/expand_table.Rd man/QIC.Rd man/round_percent.Rd man/adaptive.weights.Rd man/gkgamma.Rd man/rmvtnorm.pedigree.Rd man/wallyplot.Rd man/kwdata.Rd man/greenland.Rd man/smokehealth.Rd man/icecreamads.Rd man/col.shade.Rd man/segregate.genes.Rd man/age.Rd man/prepost.test.Rd man/earthquakes.Rd man/bdstat.Rd man/tracemp.Rd man/mfastLmCpp.Rd man/extended.shared.Rd man/write.xml.Rd man/common.shared.Rd man/geekin.Rd man/power_t_test.Rd man/happiness.Rd man/nh4.Rd man/onemargintest.Rd man/qdiag.Rd

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