Miscellaneous Esoteric Statistical Scripts

adaptive.weights | Compute weights for use with adaptive lasso. |

add_torows | Fast addition of vector to each row of matrix |

age | Compute the age of a person from two dates. |

auc | Compute the area under the curve for two vectors. |

bdstat | Danish live births and deaths |

bees | Bee data. Number of different types of bees caught. |

bin | Fast binning of numeric vector into equidistant bins |

categorize | A table function to use with magrittr pipes |

clotting | Blood clotting for 158 rats |

cmd | Correlation matrix distance |

col.alpha | Add and set alpha channel for RGB color |

colCumSum | Apply cumsum to each column of matrix |

col.shade | Shade an RGB color |

col.tint | Tint an RGB color |

common.shared | Compute a common shared environment matrix |

conditional_rowMeans | Form row means conditional on number of non-missing |

cumsumbinning | Binning based on cumulative sum with reset above threshold |

dCor | Fast distance correlation matrix |

dCov | Fast distance covariance matrix |

drop1.geeglm | Drop All Possible Single Terms to a geeglm Model Using Wald... |

drop1.geem | Drop All Possible Single Terms to a geem Model Using Wald or... |

earthquakes | Earthquakes in 2015 |

expand_table | Expand table or matrix to data frame |

extended.shared | Compute a common shared environment matrix |

fac2num | Convert factor to numeric vector |

feature.test | Inference for features identified by the Lasso |

filldown | Fill down NA with the last observed observation |

founder.shared | Compute a common shared environment matrix |

geekin | Fit a generalized estimating equation (GEE) model with fixed... |

gkgamma | Goodman-Kruskal's gamma statistic for a two-dimensional table |

greenland | Average yearly summer air temperature for Tasiilaq, Greenland |

happiness | Happiness score and tax rates for 148 countries |

ht | Show the head and tail of an object |

hwe_frequencies | Fast estimation of allele and genotype frequencies under... |

icecreamads | Ice cream consumption and advertising |

ks_cumtest | Kolmogorov-Smirnov goodness of fit test for cumulative... |

kwdata | Non-parametric Kruskal Wallis data example |

lifeexpect | Estimated life expectancy for Danish newborns |

lower.tri.vector | Split Matrix by Clusters and Return Lower Triangular Parts as... |

matched | Flu hospitalization |

maximum_subarray | Fast computation of maximum sum subarray |

MESS | Collection of miscellaneous useful and semi-useful functions |

mfastLmCpp | Fast marginal simple regresion analyses |

monte_carlo_chisq_test | Two-sided table test with fixed margins |

nh4 | Ammonia nitrogen found in river |

ordered.clusters | Check if unique elements of a vector appear in contiguous... |

pairwise_combination_indices | Compute all pairwise combinations of indices |

pairwise.cor.test | Pairwise Tests for Association/Correlation Between Paired... |

pairwise_Schur_product | Compute Schur products (element-wise) of all pairwise... |

panel.hist | Panel plot of histogram and density curve |

panel.r2 | Panel plot of R2 values for pairs |

picea | Ozone concentration damage to picea spruce |

plr | Fast computation of several simple linear regressions |

power_binom_test | Power Calculations for Exact Test of a simple null hypothesis... |

power_mcnemar_test | Power Calculations for Exact and Asymptotic McNemar Test in a... |

power_prop_test | Power Calculations for Two-Sample Test for Proportions with... |

power_t_test | Power calculations for one and two sample t tests with... |

prepost.test | Pretest-posttest RCT for quantitative observations with... |

qdiag | Fast extraction of matrix diagonal |

QIC | Quasi Information Criterion |

qpcr | Gene expression from real-time quantitative PCR |

quadform | Fast quadratic form computation |

rainman | Perception of points in a swarm |

repmat | Fast replication of a matrix |

residualplot | Plots a standardized residual |

residual_plot | Plots a standardized residual |

rmvtnorm.pedigree | Simulate residual multivariate Gaussian data from a polygenic... |

rmvt.pedigree | Simulate residual multivariate t-distributed data from a... |

rnorm_perfect | Simulate values from a perfect normal distribution |

rootonorm | Hanging rootogram for normal distribution |

round_percent | Round vector of number to percentages |

rud | Simulate randomized urn design |

scorefct | Internal functions for the MESS package |

screen_variables | Screen variable before penalized regression |

segregate.genes | Segregate genes through a pedigree |

sinv | Invert a symmetric positive-definite matrix |

smokehealth | Effect of smoking on self reported health |

soccer | Danish national soccer players |

superroot2 | Gene expression data from two-color dye-swap experiment |

tracemp | Fast computation of trace of matrix product |

usd | Unbiased standard deviation |

wallyplot | Plots a Wally plot |

write.xml | Write a data frame in XML format |

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