MKmisc: Miscellaneous Functions from M. Kohl
Version 0.993

Contains several functions for statistical data analysis; e.g. for sample size and power calculations, computation of confidence intervals, and generation of similarity matrices.

AuthorMatthias Kohl [aut, cre]
Date of publication2016-09-23 22:42:57
MaintainerMatthias Kohl <Matthias.Kohl@stamats.de>
LicenseLGPL-3
Version0.993
URL http://www.stamats.de/
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("MKmisc")

Popular man pages

AUCtest: AUC-Test
corPlot: Plot of similarity matrix based on correlation
HLgofTest: Hosmer-Lemeshow goodness of fit tests.
mi.t.test: Multiple Imputation Student's t-Test
or2rr: Transform OR to RR
quantileCI: Confidence Intervals for Quantiles
traceBack: Function to trace back
See all...

All man pages Function index File listing

Man pages

0MKmisc-package: Miscellaneous Functions from M. Kohl.
AUC: Compute AUC
AUCtest: AUC-Test
binomCI: Confidence Intervals for Binomial Proportions
corDist: Correlation Distance Matrix Computation
corPlot: Plot of similarity matrix based on correlation
fiveNS: Five-Number Summaries
heatmapCol: Generate colors for heatmaps
HLgofTest: Hosmer-Lemeshow goodness of fit tests.
IQrange: The Interquartile Range
madMatrix: Compute MAD between colums of a matrix or data.frame
madPlot: Plot of similarity matrix based on MAD
mi.t.test: Multiple Imputation Student's t-Test
oneWayAnova: A function for Analysis of Variance
or2rr: Transform OR to RR
pairwiseAUC: Compute pairwise AUCs
pairwiseFC: Compute pairwise fold changes
pairwiseFun: Compute pairwise values for a given function
pairwiselogFC: Compute pairwise log-fold changes
power.diagnostic.test: Power calculations for a diagnostic test
predValues: Compute PPV and NPV.
qboxplot: Box Plots
qbxp.stats: Box Plot Statistics
quantileCI: Confidence Intervals for Quantiles
repMeans: Compute mean of replicated spots
simCorVars: Simulate correlated variables.
simPlot: Plot of a similarity matrix.
ssize.pcc: Sample Size Planning for Developing Classifiers Using High...
stringDist: Function to compute distances between strings
stringSim: Function to compute similarity scores between strings
traceBack: Function to trace back
twoWayAnova: A function for Analysis of Variance

Functions

AUC Man page Source code
AUC.test Man page Source code
HLgof.test Man page Source code
IQrange Man page Source code
MKmisc Man page
MKmisc-package Man page
binomCI Man page Source code
corDist Man page Source code
corPlot Man page Source code
fiveNS Man page Source code
heatmapCol Man page Source code
madCI Man page Source code
madMatrix Man page Source code
madPlot Man page Source code
medianCI Man page Source code
mi.t.test Man page Source code
mi.t.test.default Man page Source code
oneWayAnova Man page Source code
or2rr Man page Source code
pairwise.auc Man page Source code
pairwise.fc Man page Source code
pairwise.fun Man page Source code
pairwise.logfc Man page Source code
power.diagnostic.test Man page Source code
predValues Man page Source code
qboxplot Man page Source code
qboxplot.default Man page Source code
qboxplot.formula Man page Source code
qbxp.stats Man page Source code
quantileCI Man page Source code
repMeans Man page Source code
seAUC Source code
simCorVars Man page Source code
simPlot Man page Source code
ssize.pcc Man page Source code
stringDist Man page Source code
stringSim Man page Source code
traceBack Man page Source code
twoWayAnova Man page Source code

Files

inst
inst/CITATION
NAMESPACE
NEWS
R
R/qboxplot.R
R/ssizePCC.R
R/predValues.R
R/oneWayAnova.R
R/pairwiselogFC.R
R/simPlot.R
R/pairwiseAUC.R
R/stringSim.R
R/corPlot.R
R/corDist.R
R/traceBack.R
R/AUC.R
R/HLgofTest.R
R/pairwiseFun.R
R/quantileCI.R
R/madMatrix.R
R/binomCI.R
R/or2rr.R
R/powerDiagnosticTest.R
R/stringDist.R
R/simCorVars.R
R/twoWayAnova.R
R/heatmapCol.R
R/pairwiseFC.R
R/AUCtest.R
R/mi.t.test.R
R/madPlot.R
R/repMeans.R
R/IQrange.R
R/fiveNS.R
MD5
DESCRIPTION
man
man/traceBack.Rd
man/madPlot.Rd
man/pairwiselogFC.Rd
man/binomCI.Rd
man/heatmapCol.Rd
man/pairwiseFun.Rd
man/simPlot.Rd
man/AUCtest.Rd
man/qbxp.stats.Rd
man/0MKmisc-package.Rd
man/corDist.Rd
man/AUC.Rd
man/ssize.pcc.Rd
man/corPlot.Rd
man/pairwiseFC.Rd
man/fiveNS.Rd
man/IQrange.Rd
man/repMeans.Rd
man/mi.t.test.Rd
man/or2rr.Rd
man/oneWayAnova.Rd
man/stringDist.Rd
man/stringSim.Rd
man/HLgofTest.Rd
man/qboxplot.Rd
man/madMatrix.Rd
man/quantileCI.Rd
man/simCorVars.Rd
man/twoWayAnova.Rd
man/predValues.Rd
man/power.diagnostic.test.Rd
man/pairwiseAUC.Rd
MKmisc documentation built on May 19, 2017, 11:22 a.m.

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