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MKomics: Omics Data Analysis
Similarity plots based on correlation and median absolute deviation (MAD); adjusting colors for heatmaps; aggregate technical replicates; calculate pairwise fold-changes and log fold-changes; compute one- and two-way ANOVA; simplified interface to package 'limma' (Ritchie et al. (2015), <doi:10.1093/nar/gkv007> ) for moderated t-test and one-way ANOVA; Hamming and Levenshtein (edit) distance of strings as well as optimal alignment scores for global (Needleman-Wunsch) and local (Smith-Waterman) alignments with constant gap penalties (Merkl and Waack (2009), ISBN:978-3-527-32594-8).
Getting started
Browse package contents
Package details |
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| Author | Matthias Kohl [aut, cre] (<https://orcid.org/0000-0001-9514-8910>) |
| Maintainer | Matthias Kohl <Matthias.Kohl@stamats.de> |
| License | LGPL-3 |
| Version | 0.7 |
| URL | https://www.stamats.de/ |
| Package repository | View on CRAN |
| Installation |
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