Description Details Types of molecular data Import function Merging Datasets Estimation MOI and frequencies References
The MLMOI package provides three functions:
moimport();
moimle();
moimerge().
The package reaches out to scientists that seek to
estimate MOI and lineage frequencies at molecular markers
using the maximum-likelihood method described in
\insertCiteSchneider2018MLMOI,
\insertCiteSchneiderEscalante2018MLMOI and
\insertCiteSchneiderEscalante2014MLMOI. Users can
import data from Excel files in various formats, and
perform maximum-likelihood estimation on the imported data
by the package's moimle()
function.
Molecular data can be of types:
microsatellite repeats (STRs);
single nucleotide polymorphisms (SNPs);
amino acids;
codons (base triplets).
The function moimport()
, is
designed to import molecular data. It imports molecular
data in various formats and transforms them into a
standard format.
Two datasets in standard format
can be merged with the function moimerge()
.
The function
moimle()
is designed to derive MLE from molecular
data in standard format.
Schneider2018MLMOI
\insertRefSchneiderEscalante2018MLMOI
\insertRefSchneiderEscalante2014MLMOI
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