decoder_str: Transforms entries to the desired coding class

In MLMOI: Estimating Frequencies, Prevalence and Multiplicity of Infection

Description

Transforms the data entries in a cell to a pre-specified coding class.

Usage

decoder_str(y, c_l, r_w, coding, rw_col, multsh)

Arguments

y	numeric vector; entries in a cell corresponding to a specific sample and a specific marker.
c_l	string; marker label.
r_w	numeric; sample ID's row number in the excel file.
coding	string; coding class of the molecular marker.
rw_col	string vector; variable used to switch between row and column in case of transposed data. Namely, c("rows ", "row ", "column ", "columns ").
multsh	string; reports warnings for multiple worksheet datasets.

Value

a list of two elements: 1) a vector of STR entries in pre-specified coding class. 2) an identifier whose value is 1 if a warning takes place.

See Also

For further details see: moimport, moi_marker.

MLMOI documentation built on Jan. 11, 2020, 9:22 a.m.