tcga.exp.convert: A Function for Reformatting TCGA mRNA Expression Matrices
In MVisAGe: Compute and Visualize Bivariate Associations
Description
Usage
Arguments
Value
Examples
View source: R/tcga.exp.convert.R
Description
This function reformats mRNA expression matrices obtained from the Broad Institute's Firehose GDAC
(https://gdac.broadinstitute.org/) so they can be used as input for mVisAGe functions.
Usage
1
Arguments
exp.mat
A matrix of mRNA expression data. Typically illuminahiseq_rnaseqv2-RSEM_genes_normalized, or a subset thereof,
including the header rows.
Value
A matrix of mRNA expression data (rows = genes, columns = samples) that is suitable for input to mVisAGe functions.
Examples
1
MVisAGe documentation built on May 1, 2019, 8:18 p.m.
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Description Usage Arguments Value Examples
View source: R/tcga.exp.convert.R
Description
This function reformats mRNA expression matrices obtained from the Broad Institute's Firehose GDAC (https://gdac.broadinstitute.org/) so they can be used as input for mVisAGe functions.
Usage
1 |
Arguments
exp.mat |
A matrix of mRNA expression data. Typically illuminahiseq_rnaseqv2-RSEM_genes_normalized, or a subset thereof, including the header rows. |
Value
A matrix of mRNA expression data (rows = genes, columns = samples) that is suitable for input to mVisAGe functions.
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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