MethyBayes: Full Bayesian Partition Model for Identifying Differentially Methylated Loci

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A full Bayesian partition model is implemented to identify differentially methylated loci from single-nucleotide resolution sequencing data.

Author
Henan Wang [cre, aut], Yuchen Wang [aut]
Date of publication
2016-07-26 12:30:19
Maintainer
Henan Wang <hwg58@mail.missouri.edu>
License
GPL-2
Version
0.1.0

View on CRAN

Man pages

demo_data
Example datasets
MethyBayes
This is a function to produce methylation identification...
seqdata
This is a function to merge BS-seq data from multiple...

Files in this package

MethyBayes
MethyBayes/src
MethyBayes/src/func_register.c
MethyBayes/src/MethyBayes.f90
MethyBayes/NAMESPACE
MethyBayes/data
MethyBayes/data/control1.rda
MethyBayes/data/case2.rda
MethyBayes/data/control2.rda
MethyBayes/data/case1.rda
MethyBayes/R
MethyBayes/R/seqdata.R
MethyBayes/R/data_doc.R
MethyBayes/R/process.R
MethyBayes/R/likelihood.R
MethyBayes/R/MethyBayes.R
MethyBayes/README.md
MethyBayes/MD5
MethyBayes/DESCRIPTION
MethyBayes/man
MethyBayes/man/MethyBayes.Rd
MethyBayes/man/seqdata.Rd
MethyBayes/man/demo_data.Rd