Description Usage Format Details
Simulated example datasets to illustrate the format of data and test the basic functions.
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Both of the data sets are data frame with 7 variables:
Factor with 4714 levels, unique ID.
Factor with 1 level "chr1", Chromosome name.
Integer of base position.
Factor with 2 levels "F" and "R" for strand.
Integer of read coverage, i.e, total number of reads.
Numeric percentage (0 - 100) of C bases on that location, i.e. percentage of reads showing methylation.
Numeric percentage of T bases on that location, i.e. percentage of reads showing un-methylation.
These are the datasets of cases and controls, each have two replicates. Case 1 and case 2 have 4714 and 5197 observations while control 1 and control 2 have 1817 and 5249 observations respectively.
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