isoplot: plot isotopologues
In Miso: Multi-Isotope Labeling for Metabolomics Analysis
Description
Usage
Arguments
Value
Examples
Description
plot unlabled and labeled Isotopologues from filtering result
Usage
1
isoplot(dat, rinx)
Arguments
dat
isotope filtering result
rinx
row index
Value
interactive plot
Examples
1
2
3
4
5
6
7
8
9
10
data(lcms)
explist <- prefilter(lcms, subgroup = c("B", "C", "D"), unlabel = "B")
exp.B <- explist$B
exp.C <- explist$C
exp.D <- explist$D
iso.C <- diso(iso1 = 'H2', n11 = 4, n12 = 2, exp.base = exp.B, exp.iso = exp.C)
iso.D <- diso(iso1 = 'C13', n11 = 9, n12 = 6, iso2 = 'N15', n21 = 1, n22 = 0,
exp.base = iso.C[,1:3], exp.iso = exp.D)
full_result <- Fresult(iso.C, iso.D)
isoplot(full_result, 1)
Miso documentation built on May 2, 2019, 8:27 a.m.
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Description Usage Arguments Value Examples
Description
plot unlabled and labeled Isotopologues from filtering result
Usage
1 | isoplot(dat, rinx)
|
Arguments
dat |
isotope filtering result |
rinx |
row index |
Value
interactive plot
Examples
1 2 3 4 5 6 7 8 9 10 | data(lcms)
explist <- prefilter(lcms, subgroup = c("B", "C", "D"), unlabel = "B")
exp.B <- explist$B
exp.C <- explist$C
exp.D <- explist$D
iso.C <- diso(iso1 = 'H2', n11 = 4, n12 = 2, exp.base = exp.B, exp.iso = exp.C)
iso.D <- diso(iso1 = 'C13', n11 = 9, n12 = 6, iso2 = 'N15', n21 = 1, n22 = 0,
exp.base = iso.C[,1:3], exp.iso = exp.D)
full_result <- Fresult(iso.C, iso.D)
isoplot(full_result, 1)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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