plot_batch: plot_batch
In MitoHEAR: Quantification of Mitochondrial DNA Heteroplasmy
View source: R/plotting_functions.R
plot_batch R Documentation
plot_batch
Description
plot_batch
Usage
plot_batch(position, heteroplasmy_matrix, batch, cluster, text_size, index)
Arguments
position
Character name of the base to plot.
heteroplasmy_matrix
Third element returned by get_heteroplasmy.
batch
Vector of batch names,with length equal to n_row of
heteroplasmy_matrix.
cluster
Vector specifying a partition of the samples.
text_size
Character specifying the size of the text for ggplot2.
index
Fifth element returned by get_heteroplasmy.
Value
ggplot2 object of the heteroplasmy level of a specific base across
samples divided according to batch.
Author(s)
Gabriele Lubatti gabriele.lubatti@helmholtz-muenchen.de
MitoHEAR documentation built on March 18, 2022, 6:47 p.m.
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View source: R/plotting_functions.R
| plot_batch | R Documentation |
plot_batch
Description
plot_batch
Usage
plot_batch(position, heteroplasmy_matrix, batch, cluster, text_size, index)
Arguments
position |
Character name of the base to plot. |
heteroplasmy_matrix |
Third element returned by get_heteroplasmy. |
batch |
Vector of batch names,with length equal to n_row of heteroplasmy_matrix. |
cluster |
Vector specifying a partition of the samples. |
text_size |
Character specifying the size of the text for ggplot2. |
index |
Fifth element returned by get_heteroplasmy. |
Value
ggplot2 object of the heteroplasmy level of a specific base across samples divided according to batch.
Author(s)
Gabriele Lubatti gabriele.lubatti@helmholtz-muenchen.de
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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