Nothing
plot_continuous_var()
has new arguments alphaCI
(sets credible interval width) and exclude_sources_below
, which allows you to remove sources from the plot whose median proportion is below a specified level for all values of the continuous variable (i.e. only plot sources with median contributions above 5%).plot_continuous_var()
#198 and #212For MixSIAR
to remain on CRAN, had to remove the mixsiar_gui()
function. mixsiar_gui()
is now found in the new GitHub-only package MixSIARgui
.
devtools::install_github("brianstock/MixSIARgui", dependencies=T) # installs MixSIAR as dependency
library(MixSIARgui) # also loads MixSIAR
mixsiar_gui()
output_JAGS()
to suppress diagnostic pdf plots with output_options$diag_save_ggmcmc = FALSE
plot_data()
to return the ggplot object so that it can be modified by the userplot_prior()
functioncalc_eps()
mixsiar_script_alligator_length_ind.R
)Nothing changed, just trying to get new Zenodo DOI (3.1.8 failed)
attach.jags
call (now directly use jags.1$BUGSoutput$sims.list
)MCMCpack::rdirichlet
instead of compositions::rDirichlet.rcomp
utils::globalVariables()
, created when making changes to pass R CMD check for CRAN submissionlibrary(MixSIAR)
mixsiar_gui()
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