coo_bookstein: Register Bookstein's coordinates

In Momocs: Morphometrics using R

Register Bookstein's coordinates

Description

Registers a new baseline for the shape, with the ldk1-th and ldk2-th points being set on (x= -0.5; y=0) and (x= 0.5; y=0), respectively.

Usage

coo_bookstein(coo, ldk1, ldk2)

Arguments

coo	matrix of ⁠(x; y)⁠ coordinates or any Coo object.
ldk1	numeric the id of the first point of the new baseline (the first, by default)
ldk2	numeric the id of the second point of the new baseline (the last, by default)

Details

For Out, it tries to do it using $ldk slot. Also the case for Opn, but if no landmark is defined, it will do it on the first and the last point of the shape.

For Out and Opn defines the first landmark as the first point of the new shapes with coo_slide.

Value

a matrix of (x; y) coordinates, or a Coo object.

See Also

Other baselining functions: coo_baseline()

Other coo_ utilities: coo_aligncalliper(), coo_alignminradius(), coo_alignxax(), coo_align(), coo_baseline(), coo_boundingbox(), coo_calliper(), coo_centdist(), coo_center(), coo_centpos(), coo_close(), coo_down(), coo_dxy(), coo_extract(), coo_flipx(), coo_force2close(), coo_interpolate(), coo_is_closed(), coo_jitter(), coo_left(), coo_likely_clockwise(), coo_nb(), coo_perim(), coo_range(), coo_rev(), coo_right(), coo_rotatecenter(), coo_rotate(), coo_sample_prop(), coo_samplerr(), coo_sample(), coo_scale(), coo_shearx(), coo_slice(), coo_slidedirection(), coo_slidegap(), coo_slide(), coo_smoothcurve(), coo_smooth(), coo_template(), coo_trans(), coo_trimbottom(), coo_trimtop(), coo_trim(), coo_untiltx(), coo_up(), is_equallyspacedradii()

Examples

h <- hearts %>% slice(1:5) # for the sake of speed
stack(h)
stack(coo_bookstein(h, 2, 4))
h <- hearts[1]
coo_plot(h)
coo_plot(coo_bookstein(h, 20, 57), border='red')

Momocs documentation built on Nov. 13, 2023, 5:07 p.m.