| combinedModuleList | a list of combined modules | 
| corumModuleList | modules from CORUM | 
| moduleCombiding | Combine modules from different resources. | 
| moduleFunctionComparing | Compare functions of target modules | 
| moduleHeatmap | moduleHeatmap | 
| moduleList | ncRNA target moudles | 
| moduleMappingID | moduleMappingID | 
| MoonFinder-package | MoonFinder | 
| moonlightingCoefficient | moonlightingCoefficient | 
| pcdqModuleList | pcdqModuleList | 
| ppi | ppi | 
| predModuleList | predicted modules | 
| rna2mod | rna2mod | 
| rna2module | RNA-module association matrix | 
| rna2protein | rna2protein | 
| SDI | Shannon diversity index | 
| simMatBP.Jiang | a semantic similarity (Jiang) matrix | 
| simMatBP.Lin | a semantic similarity (Lin) matrix | 
| simMatBP.Rel | a semantic similarity (Rel) matrix | 
| simMatBP.Resnik | a semantic similarity (Resnik) matrix | 
| simMatBP.Wang | a semantic similarity (Wang) matrix~ | 
| uniGene | Background gene symbols | 
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