PCoABootstrap: Plots an object of class PCoABootstrap

In MultBiplotR: Multivariate Analysis Using Biplots in R

Plots an object of class PCoABootstrap

Description

Plots an object of class PCoABootstrap

Usage

## S3 method for class 'PCoABootstrap'
plot(x, F1=1, F2=2, Move2Center=TRUE, 
BootstrapPlot="Ellipse", confidence=0.95, Colors=NULL, ...)

Arguments

x	An object of class "PCoABootstrap"
F1	First dimension to plot
F2	Second dimension to plot
Move2Center	Translate the ellipse center to the coordinates
BootstrapPlot	Type of Bootstrap plot to draw: "Ellipse", "ConvexHull", "Star"
confidence	Confidence level for the bootstrap plot
Colors	Colors of the objects
...	Additional parameters for graphical representations

Details

Draws the bootstrap confidence regions for the coordinates of the points obtained from a Principal Coodinates Analysis

Value

No value returned

Author(s)

Jose Luis Vicente Villardon

References

J.R. Demey, J.L. Vicente-Villardon, M.P. Galindo, A.Y. Zambrano, Identifying molecular markers associated with classifications of genotypes by external logistic biplot, Bioinformatics 24 (2008) 2832.

Examples

data(spiders)
Dis=BinaryProximities(spiders)
pco=PrincipalCoordinates(Dis, Bootstrap=TRUE, BootstrapType="Products")
plot(pco, Bootstrap=TRUE)

MultBiplotR documentation built on Nov. 21, 2023, 5:08 p.m.