plot.Unfolding: Plots an Unfolding Representation

In MultBiplotR: Multivariate Analysis Using Biplots in R

Plots an Unfolding Representation

Description

Plots an Unfolding Representation

Usage

## S3 method for class 'Unfolding'
plot(x, A1 = 1, A2 = 2, ShowAxis = FALSE,
margin = 0.1, PlotSites = TRUE, PlotSpecies = TRUE, PlotEnv = TRUE,
LabelSites = TRUE, LabelSpecies = TRUE, LabelEnv = TRUE, 
SpeciesQuality = FALSE, MinQualityVars = 0, dp = 0, 
PlotAxis = FALSE, TypeScale = "Complete", ValuesScale = "Original", 
mode = "h", CexSites = NULL, CexSpecies = NULL, CexVar = NULL, 
ColorSites = NULL, ColorSpecies = NULL, ColorVar = NULL, 
PchSites = NULL, PchSpecies = NULL, PchVar = NULL, 
SizeQualSites = FALSE, SizeQualSpecies = FALSE, 
SizeQualVars = FALSE, ColorQualSites = FALSE, 
ColorQualSpecies = FALSE, ColorQualVars = FALSE, SmartLabels = FALSE, 
PlotTol = FALSE, ...)

Arguments

x	An object of class Unfolding
A1	Axis 1 of the representation.
A2	Axis 1 of the representation.
ShowAxis	Should the axis be shown?
margin	Margin for the plot (precentage)
PlotSites	Should the sites be plotted?
PlotSpecies	Should the species be plotted?
PlotEnv	Should the environmental variables be plotted?
LabelSites	Should the sites be labelled?
LabelSpecies	Should the species be labelled?
LabelEnv	Should the environmental variables be labelled?
SpeciesQuality	Min species quality to plot
MinQualityVars	Minimum quality of a var to be plotted.
dp	A set of indices with the variables that will show the projections of the individuals.
PlotAxis	Should the axis be plotted?
TypeScale	Type of scale to use : "Complete", "StdDev" or "BoxPlot"
ValuesScale	Values to show on the scale: "Original" or "Transformed"
mode	Mode of the biplot: "p", "a", "b", "h", "ah" and "s".
CexSites	Size for the symbols and labels of the sites. Can be a single common size for all the points or a vector with individual sizes.
CexSpecies	Size for the symbols and labels of the species. Can be a single common size for all the points or a vector with individual sizes.
CexVar	Size for the symbols and labels of the variables. Can be a single common size for all the points or a vector with individual sizes.
ColorSites	Color for the symbols and labels of the sites. Can be a single common color for all the points or a vector with individual colors.
ColorSpecies	Color for the symbols and labels of the species. Can be a single common color for all the points or a vector with individual colors.
ColorVar	Color for the symbols and labels of the variables. Can be a single common color for all the points or a vector with individual colors.
PchSites	Symbol for the sites points. See help(points) for details.
PchSpecies	Symbol for the species points. See help(points) for details.
PchVar	Symbol for the variables points. See help(points) for details.
SizeQualSites	Should the size of the site points be related to their qualities of representation (predictiveness)?
SizeQualSpecies	Should the size of the species points be related to their qualities of representation (predictiveness)?
SizeQualVars	Should the size of the variables points be related to their qualities of representation (predictiveness)?
ColorQualSites	Should the color of the sites points be related to their qualities of representation (predictiveness)?
ColorQualSpecies	Should the color of the species points be related to their qualities of representation (predictiveness)?
ColorQualVars	Should the color of the variables points be related to their qualities of representation (predictiveness)?
SmartLabels	Plot the labels in a smart way
PlotTol	Should the tolerances be plotted
...	Aditional graphical parameters.

Details

Plots an Unfolding Representation

Value

A plot of the unfolding representation.

Author(s)

Jose Luis Vicente-Villardon

References

de Leeuw, J. (2005). Multidimensional unfolding. Encyclopedia of statistics in behavioral science.

Examples

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MultBiplotR documentation built on Nov. 21, 2023, 5:08 p.m.