The Ratkowsky3
data frame has 15 rows and 2 columns.
This data frame contains the following columns:
A numeric vector of dry weights of onion bulbs and tops.
A numeric vector of growing times.
This model and data are an example of fitting sigmoidal growth curves taken from Ratkowsky (1983). The response variable is the dry weight of onion bulbs and tops, and the predictor variable is growing time.
Ratkowsky, D.A. (1983). Nonlinear Regression Modeling. New York, NY: Marcel Dekker, pp. 62 and 88.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24  Try < function(expr) if (!inherits(val < try(expr), "tryerror")) val
plot(y ~ x, data = Ratkowsky3)
## causes NA/NaN/Inf error
Try(fm1 < nls(y ~ b1 / ((1+exp(b2b3*x))**(1/b4)), data = Ratkowsky3,
start = c(b1 = 100, b2 = 10, b3 = 1, b4 = 1),
trace = TRUE))
Try(fm1a < nls(y ~ b1 / ((1+exp(b2b3*x))**(1/b4)), data = Ratkowsky3,
start = c(b1 = 100, b2 = 10, b3 = 1, b4 = 1),
alg = "port", trace = TRUE))
Try(fm2 < nls(y ~ b1 / ((1+exp(b2b3*x))**(1/b4)), data = Ratkowsky3,
start = c(b1 = 700, b2 = 5, b3 = 0.75, b4 = 1.3),
trace = TRUE))
Try(fm2a < nls(y ~ b1 / ((1+exp(b2b3*x))**(1/b4)), data = Ratkowsky3,
start = c(b1 = 700, b2 = 5, b3 = 0.75, b4 = 1.3),
alg = "port", trace = TRUE))
Try(fm3 < nls(y ~ 1 / ((1+exp(b2b3*x))**(1/b4)), data = Ratkowsky3,
start = c(b2 = 10, b3 = 1, b4 = 1), algorithm = "plinear",
trace = TRUE))
Try(fm4 < nls(y ~ 1 / ((1+exp(b2b3*x))**(1/b4)), data = Ratkowsky3,
start = c(b2 = 5, b3 = 0.75, b4 = 1.3), algorithm = "plinear",
trace = TRUE))

Questions? Problems? Suggestions? Tweet to @rdrrHQ or email at ian@mutexlabs.com.
Please suggest features or report bugs with the GitHub issue tracker.
All documentation is copyright its authors; we didn't write any of that.
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.