runparallelNUCOM: Run parallel NUCOM

In NUCOMBog: NUtrient Cycling and COMpetition Model Undisturbed Open Bog Ecosystems in a Temperate to Sub-Boreal Climate

Description

Code to run NUCOMBog parallel on multiple cores.

Usage

runparallelNUCOM(setup, clustertype, numCores = 1, parameters)

Arguments

setup	The setup needs to be made before by running the setup_NUCOM function.
clustertype	Clustertype: The model has only been tested on SOCK cluster, which is the set to default.
numCores	Number of Cores on which are model needs to be run (NOTE: Non-parallel runs can only be run on 1 core). Default is 1.
parameters	The parameters which are used in the model. If no parameter values are given the default values will be used. The parameters have to have the format of a dataframe with colum names: "names" and "values". The default parameters are from Heijmans et al. 2008.

Author(s)

JWM Pullens

Source

The executable and the source code of the model can downloaded from https://github.com/jeroenpullens/NUCOMBog.

References

Heijmans, M., Mauquoy, D., van Geel, B., and Berendse, F. (2008). Long-term effects of climate change on vegetation and carbon dynamics in peat bogs. Journal of Vegetation Science, 19(3)

Examples

## Not run: 
!!the variable "test_setup" is from the function setupNUCOM, see the help for more information!!

parallel<-runparallelNUCOM(setup = test_setup,
                            clustertype = "SOCK",
                            numCores = 1,
                            parameters=initialParameters)

## End(Not run)

NUCOMBog documentation built on May 2, 2019, 11:01 a.m.