runNUCOM: Run NUCOMBog

In NUCOMBog: NUtrient Cycling and COMpetition Model Undisturbed Open Bog Ecosystems in a Temperate to Sub-Boreal Climate

Description

Code to run NUCOMBog on a single core.

Usage

runNUCOM(setup, parameters = NULL)

Arguments

setup	The setup structure created by setup_NUCOM function needs to be inserted here, for more information see the setup_NUCOM function help, by typing "?NUCOMBog::setup_NUCOM".
parameters	The parameters which are used in the model. If no parameter values are given the default values will be used. The parameters have to have the format of a dataframe with colum names: "names" and "values". See example data available via the testcopydata function. The default parameters are from Heijmans et al. 2008.

Author(s)

JWM Pullens

Source

The executable of the model can downloaded from https://github.com/jeroenpullens/NUCOMBog

References

Heijmans, M., Mauquoy, D., van Geel, B., and Berendse, F. (2008). Long-term effects of climate change on vegetation and carbon dynamics in peat bogs. Journal of Vegetation Science, 19(3)

Examples

## Not run: 
names<-c("CO2ref","gram_Beta","eric_MaxGr")
initialParameters <- c(380,0.5,65)
initialParameters<-data.frame(names,initialParameters)
names(initialParameters)<-c("names","values")

runNUCOM(setup = test_setup_singlecore,parameters=initialParameters)

## with predefined parameters:
runnucom(setup = test_setup_singlecore,parameters=NULL)

## End(Not run)

NUCOMBog documentation built on May 2, 2019, 11:01 a.m.