adapt.a: Adaptive Alpha

In NetworkToolbox: Methods and Measures for Brain, Cognitive, and Psychometric Network Analysis

Description

Compute an alpha value adjusted for sample size. The adjusted value is based on Perez and Pericchi's (2014) formula (equation 11, see below) using a reference sample, which can be defined a priori or estimated using the sample size calculation from power.

α * √(n0 times (log(n0) + χ^2_α(1))) / √(n* times (log(n*) + χ^2_α(1)))

Usage

adapt.a(
  test = c("anova", "chisq", "cor", "one.sample", "two.sample", "paired"),
  ref.n = NULL,
  n = NULL,
  alpha = 0.05,
  power = 0.8,
  efxize = c("small", "medium", "large"),
  groups = NULL,
  df = NULL
)

Arguments

test	Type of statistical test being used. Can be any of the tests listed
ref.n	n0 in the above equation. Reference sample size. If sample size was determined a priori, then the reference number of participants can be set. This removes the calculation of sample size based on power
n	n* in the above equation. Number of participants in the experiment sample (or per group)
alpha	α in the above equation. Alpha value to adjust. Defaults to .05
power	Power (1 - β) value. Used to estimate the reference sample size (n0). Defaults to .80
efxize	Effect size to be used to estimate the reference sample size. Effect sizes are based on Cohen (1992). Numeric values can be used. Defaults to "medium"
groups	Number of groups (only for test = "anova")
df	Number of degrees of freedom (only for test = "chisq")

Value

A list containing the following objects:

adapt.a	The adapted alpha value
crit.value	The critical value associated with the adapted alpha value
orig.a	The original alpha value
ref.n	The reference sample size based on alpha, power, effect size, and test
exp.n	The sample size of the experimental sample
power	The power used to determine the reference sample size
test	The type of statistical test used

Author(s)

Alexander Christensen <[e-mail]>

References

Cohen, J. (1992). A power primer. Psychological Bulletin, 112, 155-159.

Perez, M. E., & Pericchi, L. R. (2014). Changing statistical significance with the amount of information: The adaptive a significance level. Statistics & Probability Letters, 85, 20-24.

Examples

#ANOVA
adapt.anova <- adapt.a(test = "anova", n = 200, alpha = .05, power = .80, groups = 3)

#Chi-square
adapt.chisq <- adapt.a(test = "chisq", n = 200, alpha = .05, power = .80, df = 3)

#Correlation
adapt.cor <- adapt.a(test = "cor", n = 200, alpha = .05, power = .80)

#One-sample t-test
adapt.one <- adapt.a(test = "one.sample", n = 200, alpha = .05, power = .80)

#Two-sample t-test
adapt.two <- adapt.a(test = "two.sample", n = 200, alpha = .05, power = .80)

#Paired sample t-test
adapt.paired <- adapt.a(test = "paired", n = 200, alpha = .05, power = .80, efxize = "medium")

NetworkToolbox documentation built on May 28, 2021, 5:11 p.m.