findGenes: findGenes

In NormExpression: Normalize Gene Expression Data using Evaluated Methods

findGenes

Description

Please refer to the file /inst/doc/readme.pdf.

Usage

findGenes(g, qlower = NULL, qupper = NULL, pre_ratio = NULL)

Arguments

g	Please refer to the file /inst/doc/readme.pdf.
qlower	Please refer to the file /inst/doc/readme.pdf.
qupper	Please refer to the file /inst/doc/readme.pdf.
pre_ratio	Please refer to the file /inst/doc/readme.pdf.

Examples

##---- Should be DIRECTLY executable !! ----
##-- ==>  Define data, use random,
##--	or do  help(data=index)  for the standard data sets.

## The function is currently defined as
function (g, qlower = NULL, qupper = NULL, pre_ratio = NULL)
{
    gene_name <- rownames(g)
    g <- unlist(g)
    seen <- which(g >= qlower & g <= qupper)
    counts <- length(seen)
    if (counts >= pre_ratio * length(g)) {
        gene_name
    }
  }

NormExpression documentation built on May 29, 2024, 2 a.m.