cyclical.min.max: cyclical.min.max

Description Usage Arguments Value Author(s) References

View source: R/cyclical.min.max.R

Description

Returns the log-maximum likelihood and the estimator of the mean under cyclical profile with minimum at min1 and maximum at max1 (min1 < max1).

Usage

1
cyclical.min.max(data,x,n.rep,min1,max1)

Arguments

data

A vector containing the expressions of one gene.

x

A vector consisting of the average expression at time points (1, 2,... ,T), where T is the total number of time points.

n.rep

A vector consisting of the number of replicate arrays at time points (1, 2,... ,T), where T is the total number of time points.

min1

Cyclical profile with minimum at min1

max1

cyclical profile with maximum at max1

Value

logelr

Log-maximum likelihood

mu

A vector containing the estimator of the mean

Author(s)

Tianqing Liu, Nan Lin, Ningzhong Shi and Baoxue Zhang

Maintainer: Tianqing Liu <tianqingliu@gmail.com>

References

Liu, T., Lin, N., Shi, N. and Zhang, B. (2009), Information criterion-based clustering with order-restricted candidate profiles in short time-course microarray experiments. BMC Bioinformatics, 10: 146.

Robertson, T., Wright, F. T. and Dykstra, R. L. (1988). Order restricted statistical inference. New York: Wiley.

Shi, N., Gao, W. and Zhang, B. (2001). One sided estimation and testing problems for location models from grouped samples. Commun Statist-Simula, 30: 885-898.


ORIClust documentation built on May 1, 2019, 8:03 p.m.