PAMpalSettings: Constructor for PAMpalSettings Object

In PAMpal: Load and Process Passive Acoustic Data

Constructor for PAMpalSettings Object

Description

Create a PAMpalSettings object. Any values that are not supplied will be asked for interactively. Three processing functions will also be added by default: standardClickCalcs, roccaWhistleCalcs, and standardCepstrumCalcs

Usage

PAMpalSettings(
  db = NULL,
  binaries = NULL,
  settings = NULL,
  functions = NULL,
  verbose = TRUE,
  default = FALSE,
  ...
)

Arguments

db	the full path to a Pamguard database file or folder of databases
binaries	a folder containing Pamguard binary files, all subfolders will also be added
settings	an XML settings file from Pamguard
functions	a named list of additional functions to add
verbose	logical flag to show messages
default	logical flag to use default measurement function parameters
...	values to pass on to default standardClickCalcs function

Value

A PAMpalSettings object

Author(s)

Taiki Sakai [e-mail]

Examples

# can be run with no arguments with popup menu selections
if(interactive()) pps <- PAMpalSettings()
db <- system.file('extdata', 'Example.sqlite3', package='PAMpal')
bin <- system.file('extdata', 'Binaries', package='PAMpal')
# or data folders can be supplied ahead of time
if(interactive()) pps <- PAMpalSettings(db=db, binaries=bin)

PAMpal documentation built on April 4, 2025, 4:21 a.m.